Paenibacillus marchantiae: PTQ21_03900
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Entry
PTQ21_03900 CDS
T08974
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmah
Paenibacillus marchantiae
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_03900
Enzymes [BR:
pmah01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PTQ21_03900
DNA repair and recombination proteins [BR:
pmah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PTQ21_03900
Prokaryotic type
PTQ21_03900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WDQ33474
LinkDB
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Position
complement(851196..852542)
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AA seq
448 aa
AA seq
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MKLFIHRKDLRTDDLVAFDYLLHQDAESLHVLIYDPFLLRQGREQEHSGVNFLQHAVELG
KRYRKSGRTLHMAYGKPAEVIDYILEQMQGRIDEVVVHRDMTPYAIERDRGIRKVTEERE
VTFTQLTDHLLMDLKGFADFTGKSEPYKVFAAFHRRWVEFMNEHPNPASTTTVAEVKVSD
QQIEWPETFQVPQQLLAYDVSDLNDPHLMLDGFLSDRIADYGDHRDEYEAYEPSRLSSYV
AVGAVSIRKMYDAAKRTEHSDEWIRQLCFRDFYLYRAVYESHYFTYEKVYDLSLLSEVHF
ERWCKAETGIPIIDAAMTELNETGHMPNRLRILTAMFLTKNLQCPYTLGEAYFRRKLRDY
DNIQNRGNWLWCASLGENAAPYFRVNNPVTQSEKYDPQGDYIRKWLPDLKGLHSKEIHQP
RQDAIVDLKTSRQSAIEIYKQILASRQH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattcatacatcgcaaagatttgcgcacagatgacctggtcgcattcgattat
ttactgcaccaggatgcagagagtctgcatgtgctcatctatgatccgtttctgctgcgg
caaggtcgtgaacaggaacatagtggagtgaattttctacagcatgctgtagagcttggt
aagcggtaccgcaagtcaggccgtacgctgcacatggcttatggcaaaccagctgaggtg
attgattatattctcgaacagatgcaaggtcgtatagatgaagttgtagttcatcgggat
atgaccccatatgcaattgaacgggaccgtggaatacgcaaggtaaccgaggaacgagaa
gtcacatttacgcagctgacggatcatctgctgatggatttgaagggattcgctgatttt
acgggcaagtccgagccatataaagtatttgctgccttccaccgacgctgggtggaattc
atgaatgagcatcctaatccagcttcaaccactacggttgcagaggtgaaggtcagtgat
cagcagatagaatggccagagaccttccaggtaccacaacaattgctggcatatgatgta
tctgatttgaatgatcctcatctaatgttggatggatttttatctgatagaattgccgat
tacggcgaccatcgggatgaatatgaagcttatgaaccgagccggctcagttcttatgta
gctgtgggggctgtatccatccgcaagatgtacgatgctgcgaaacgcacggagcattcg
gacgagtggatcagacaattgtgcttccgcgacttctatctgtatcgggcagtgtatgag
agtcattattttacatatgaaaaggtatatgatctgtcgctgctcagcgaggttcacttc
gaacgatggtgcaaggccgaaacaggcattccgattatcgacgcagcgatgacggaactg
aatgagactggacatatgccgaatcggcttcgtattttgaccgcaatgtttcttaccaaa
aatctgcagtgcccatacacgctgggtgaagcgtatttcagacgtaagctccgtgactat
gacaatattcaaaaccggggcaactggctgtggtgtgcatcacttggcgagaatgcagct
ccatactttcgggtgaacaatccggtgacacagtcagagaagtatgatccccaaggggat
tatatccgcaaatggctgcctgacctgaagggtttgcatagcaaagagattcatcagcct
cgccaggatgccattgtggatctgaaaacctcaagacaatcggctattgagatctataaa
caaattctagctagtcgtcagcattga
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