Paenibacillus marchantiae: PTQ21_04670
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Entry
PTQ21_04670 CDS
T08974
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pmah
Paenibacillus marchantiae
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PTQ21_04670
Enzymes [BR:
pmah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PTQ21_04670
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
Motif
Other DBs
NCBI-ProteinID:
WDQ33614
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Position
complement(1026169..1027794)
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AA seq
541 aa
AA seq
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MSRRLVKKGFSSFLLLVMMAAAVLYPTSTGHAATINVTDNGSRIEVNTGAGLVYTVNKTN
GDIISAKMNGTELNGSSKGSHISSGLGSANVTWNTSPSGSTLLITVSTSTLTHYYASRGG
ENIIYMATYVTAEPSVGELRYIFRGNGSVLTGVPASSNNRNNTGAIESEDVFGYANGQST
SKYYGNDQAKDLTIRGVTGNGVGVFMAYGDREKSSGGPFFRDIQFQSGGDTEVYNYMNSG
HAQTENWRMGLHGPYALIFTTGATPSVPNFSWMSSLNLTGWVSSRGNVVLNGLSGMDTGY
AYTVGFANSNAQYWVNASSSGAAAKYSMIPGTYTMTVYKGELAVYTESVNVTGGSTTTLN
TRTINNDPSKASSIWRIGNWDGTPSEFLNGQTIPIRHPSDSRNPSWGPVSYATGSATNKF
PAIQFRGQNSPTTVTFSLNSSQAASSHVLNIGITAAYNNGRPSVTINGQTLTNPAASSQP
NSRSFTIGTYRGNNTIFSWNIPASYFVNGSNTVTITPISGSSDLGNWLSAGWVYDCVELL
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagacgtttagtgaagaagggattcagttcgtttctattactggtgatgatggca
gcagcggtattatatccaacatccaccggacacgcagccaccatcaatgttacggataac
gggtcgaggattgaagtaaacacaggagcaggtctggtatacacggtgaataaaaccaat
ggcgatatcatatctgccaaaatgaacggaacagagctgaacggctccagcaaggggtcc
catatcagctctggtttgggttctgccaatgtaacttggaacacatctccctcaggatca
accctattgatcaccgtctcaaccagcacgcttacccactactatgcatcacgtggcggt
gagaacattatctatatggcaacgtacgtcacagcagaaccgtctgtgggtgaattgcgc
tatattttccggggtaacggcagcgtgttaacaggggttccggccagctcgaataatcgg
aataacaccggcgcgattgagagcgaggatgtttttggttacgccaacggacagagtacc
tcgaagtattacggcaacgaccaggccaaggatctgaccattcgaggcgttacggggaat
ggtgtgggcgtgtttatggcctatggcgaccgagagaagagctcgggaggtccgttcttc
cgtgatattcagttccagagtggtggagatacggaggtctacaattacatgaattcagga
catgcccagacagaaaattggcgtatgggcctgcatgggccgtatgccttgattttcacc
accggtgcaacgccaagcgtacctaattttagctggatgtcgagtctaaacctgacaggt
tgggtgtccagccgaggtaatgtcgtgcttaacgggctctctggcatggatacgggttat
gcatatacggttggttttgccaacagcaacgcccaatattgggtgaatgcctcttcgagc
ggggcagctgccaaatacagcatgattccaggtacatacaccatgacggtgtataagggg
gaactggccgtctataccgaaagtgtgaacgtcactggaggatcaacgacaacgctgaat
acgcgtacgattaacaatgatccaagtaaagcatccagcatctggcgcattgggaattgg
gatggtacaccgtcagagttcctgaacggccagacaattccgatccgtcatccttccgat
agccgtaatccaagctggggccctgtcagttatgccaccggcagtgcaaccaacaagttc
cctgcgattcagttccggggacaaaactcgcccacaaccgttacctttagcctgaactct
tcccaagcggcatcttcgcatgttcttaacatcggtattacggcagcatacaacaatgga
agacccagcgtaacgattaacggtcagacgttaaccaatccggcagcctcctcccaaccg
aactctcgtagctttacgattgggacctaccgaggcaacaatacaatcttttcctggaat
ataccggcatcctattttgttaatgggtccaacacggtaaccattacgccaatcagcggc
tccagcgacttgggcaattggttaagtgccgggtgggtgtatgactgtgttgaattgttg
aattaa
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