Paenibacillus marchantiae: PTQ21_05420
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Entry
PTQ21_05420 CDS
T08974
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pmah
Paenibacillus marchantiae
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmah03032
]
PTQ21_05420
03036 Chromosome and associated proteins [BR:
pmah03036
]
PTQ21_05420
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_05420
DNA replication proteins [BR:
pmah03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PTQ21_05420
Chromosome and associated proteins [BR:
pmah03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PTQ21_05420
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PTQ21_05420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WDQ33749
LinkDB
All DBs
Position
1197503..1197775
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTDLINNISTKSGLTKKDVESVLNGFLGEITDALASGDKVQLIGFGTFETRKRSGRTG
RNPQTGNEIVIPESTVPAFKAGNKLKEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatctgattaacaacatttccaccaaaagcggtttgactaaaaaagac
gttgagtccgtattgaacggctttttgggagaaattacagatgcacttgccagcggagac
aaagtacaactgatcggctttggcacttttgagacccgcaaacgttccggtcgtaccgga
cgtaacccgcaaacagggaatgaaatcgtgattcctgagtccaccgttcctgcgtttaaa
gcaggcaacaaacttaaagaagccgtaaaataa
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