Paenibacillus marchantiae: PTQ21_05770
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Entry
PTQ21_05770 CDS
T08974
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PTQ21_05770 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmah03021
]
PTQ21_05770 (rpoE)
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_05770 (rpoE)
Transcription machinery [BR:
pmah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PTQ21_05770 (rpoE)
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PTQ21_05770 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
BUD22
MetOD2
Mnd1
Motif
Other DBs
NCBI-ProteinID:
WDQ33808
LinkDB
All DBs
Position
1271421..1271996
Genome browser
AA seq
191 aa
AA seq
DB search
MSTSLNLKIDKEKVREIPLVDLAFMVLKAANTPYYYRDLMNEVAKQRGMTDEEINEFIAQ
LYTEINIDGRFACVGTSLWGLKRWYPVAGSEDTMTGAKRPRIINDEDDDLEDEDFGEEED
SYNSDEDFDNSDDDQDDDDDDDDDDEDDIFDEEDGEEEVLVEDDDLEEEDLEEGDEEESE
DEGEFDDDSDK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacctcgctcaatttgaaaattgataaagaaaaggtcagagagattcctttggtg
gacctcgcctttatggtgctgaaagcggccaatacgccgtattactaccgtgatttgatg
aatgaggtagctaaacagcgcggaatgactgatgaagaaatcaacgagtttatcgcccag
ttatataccgagattaatatcgatggccgttttgcttgcgtcggtacaagtctgtggggc
ttgaagcgctggtatccggtagctggatcggaagataccatgacgggtgcgaagcgtccg
cgcatcatcaacgatgaagacgatgatctggaagatgaggacttcggggaagaggaagac
agctacaacagcgacgaagacttcgacaattctgatgatgatcaggacgatgatgatgat
gacgatgatgatgacgaagacgacatctttgacgaagaagatggcgaagaagaagttcta
gttgaagatgacgatttggaagaggaagacctcgaagaaggcgatgaagaagagtccgaa
gacgagggtgaatttgacgacgattccgataagtag
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