Paenibacillus marchantiae: PTQ21_09960
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Entry
PTQ21_09960 CDS
T08974
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah00052
Galactose metabolism
pmah00511
Other glycan degradation
pmah00600
Sphingolipid metabolism
pmah01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PTQ21_09960
09103 Lipid metabolism
00600 Sphingolipid metabolism
PTQ21_09960
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PTQ21_09960
Enzymes [BR:
pmah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
PTQ21_09960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2
CBM_6
Glyco_hydro_2_N2
Invasin_D3
Big_1
BetaGal_ABD2
BetaGal_gal-bd
Motif
Other DBs
NCBI-ProteinID:
WDQ34536
LinkDB
All DBs
Position
2190527..2194006
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AA seq
1159 aa
AA seq
DB search
MNQKKLFTDGWQFAKSKLEVTESAGLTFEPVELPHDWLIYNTLELYEDSIGWYRKTFPYT
KDEQQLLLCFDGVYMDSSVYVNGQLVGEWKYGYSAFEHEITSALVEGDNEIVVKVVHQSP
NSRWYSGAGIYRNLWLKTRDRNHIVTDGTYVSIQQQPEGWQVEVDTELSLNQNAQLVHTI
WYQGNQIVSSKEDVTATAGKDTGYGEIQSNSQMLTVNLPKLWSPDEPNLYDLVTELQVAT
GEQGYETIETATQRIGFRDIKLDANEGFHLNGVKMKLNGVCEHHDLGALGAAFNLTALRR
RFVLLKEMGVNAIRTAHNMPAKEFMELADEMGMLIVSEAFDMWERAKTPYDYARFFPEWA
HTDVKSWVKRDRNHASLIMWSIGNEIYDTHADERGQEITRMLMDYVLEFDPKGNAGVTIG
SNYMPWENAQKCADIVKLAGYNYAEKYYDKHHEEHPDWIIYGSETSSVVQSRGIYHFPFE
QSILADDDEQCSALGNSTTSWGAKSAEYCILAERDTPYSLGQFLWTGFDYIGEPTPYHTK
NSYFGQLDTATFPKDSYYIYQAAWTDYKKSPMVHLFPYWDFSPGQLIDVRVCSNAPKIEL
QLNGKTIGTYDIDHAKGTQLSGWWKVPYEEGELKAIAYDEHGNVIATDVQKSFTDAKKIR
LQTDREQLQANGTDLIFVEIQVEDEAGNPVQNANNRVQVQVTGAGRLLGLDNGDSTDYDP
YKGLSRRLFSGKLMAIIGATNESGTVRIEVTSEGLESAAAEFESRAVAGARDRTLGDSEA
AAGQEHIVLMSNTERPVLTGRPQEIPLRKIEIISEGGQLFDPSKKQMTVSAKLYPENTSY
WDIEWAVVNDAGIESNIAKVEANGLEVNVSALGDGEFRLRATSSNGTDKTKLISQLEFKA
TGLGTAYKDPYGFITGGLYDYTKGDVGNGNERGVATSRDGETHVGFRNIDFGPYGSDTIT
IPIFALSSEEYFIQIWEGMPDEEGSTLLADVVYDKESRWNVYQEETYQLSKRLSGITSIC
FVLKQKIHIKGFSFERQSRAFEQNTAASCDHLYGDTFKIEGDHVEGIGNNVSLEFENMDF
TAEGTSKLVIYGRSTIDKNTIHIRFAGEDGQSNQLVEFTQSDGYEERVFELEQVKGVQKV
TFIFLPGSQFDFGWFRFEK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaaaagctttttacggatggatggcaatttgcgaaaagtaagctggaggtt
acggagtctgcggggttaacgtttgaaccagttgagcttcctcatgattggctgatctat
aatacgcttgaactgtatgaggacagcatcggatggtatcgcaagactttcccatatacg
aaggatgagcagcagcttctgctttgctttgacggggtgtatatggattcttccgtatat
gtgaacggtcagcttgttggggaatggaagtacggttattcggcttttgagcatgagatc
acgagtgctttggtggaaggtgacaatgaaattgtagtcaaagttgtgcatcagagtccc
aacagcagatggtattcgggagccggaatttatcgcaatttgtggctcaaaacgagagat
cggaatcatatcgtcacagacggtacctatgtatcgattcagcagcagccagaaggctgg
caggttgaggtggatacggagctgagtctcaatcagaacgcacaacttgtgcacacgatt
tggtatcagggtaatcagatcgtatccagcaaagaggacgttacagctacagcgggtaaa
gacaccggatatggagagatacaatcgaacagccaaatgctgacggtcaatcttccgaag
ttatggagcccggatgaaccgaatctgtatgatctggtaacggaactgcaagtagctaca
ggtgagcagggctatgagacgatcgagaccgccacacagcggattggtttcagggatatc
aagttggatgcaaacgaaggattccacctgaatggggtcaagatgaagctgaacggcgtg
tgtgaacaccatgatcttggggcgctgggggctgcttttaacctaactgcgctgcgcaga
agatttgtgctattgaaggaaatgggcgttaacgccatccggactgctcataacatgcct
gccaaagagttcatggaacttgcggatgagatgggaatgctgatcgtttcggaagcgttc
gatatgtgggagagagccaaaaccccttacgactatgcgagatttttcccggaatgggcg
cataccgatgtaaagagctgggtgaagcgtgatcgtaaccatgcaagtctgatcatgtgg
agtattggtaacgaaatttatgatactcatgcggatgagcggggccaagaaataacccgc
atgctgatggattatgtactggaattcgatccaaaagggaacgcaggcgtgaccattggt
tcgaactacatgccgtgggaaaacgcacaaaaatgcgccgacatcgtgaagctcgcaggt
tataactacgcggaaaaatactacgacaaacatcacgaagaacatccggactggattatc
tatggtagtgaaacatcgtctgtggtgcagagccgtggaatctatcacttcccgttcgag
caatctattctggccgacgatgacgagcagtgctcagctttgggtaatagtacaacaagc
tggggcgcaaagtcagcagaatattgcattttggcagaacgagatacgccgtattccttg
gggcagttcctgtggacgggattcgattatattggagagccgacaccgtatcatacgaag
aattcgtattttggacagctggatacagcaacgttcccgaaggattcctattatatctac
caagcggcctggacggattacaagaaaagtccgatggttcacctgttcccttactgggat
ttcagtcctggtcagctgatcgatgtacgcgtgtgcagtaatgcgccgaagattgaattg
cagctgaatggcaaaacaatcggcacgtatgatatcgatcacgcaaagggaacccagctg
tcaggctggtggaaagtgccatatgaagaaggtgagctcaaagccatcgcttatgatgaa
cacggcaacgttattgcaacggatgtgcaaaaatcctttacagatgcgaagaagattcgt
ctgcaaaccgatcgggagcagctgcaagcgaacggtacagatcttattttcgtggaaatt
caagtggaagatgaagctggtaatcccgtgcaaaatgcaaacaaccgtgtgcaggtccaa
gtgacaggtgcaggtcgtctgttgggtctcgataacggggacagtacggactatgatcca
tacaaaggtcttagtagaagattgttcagcggcaagctgatggcaattatcggggcaacg
aacgaatcgggaaccgtgcggattgaggtgacttcggaagggttggaaagtgcagctgcc
gagttcgaatcacgagctgttgcaggcgcaagagatcgtaccttaggtgattccgaggcc
gctgcaggtcaggagcatatcgtactcatgagtaatacagaacgtccggttctgacggga
cgtccgcaggagattcctttgcggaaaatcgagattatcagcgaaggtggacagctattc
gatccatcgaaaaagcagatgacggtcagcgccaagctgtatccggagaacacatcctat
tgggatattgagtgggcagttgtgaacgacgcaggtatcgaatccaacattgccaaggtc
gaagccaacggtctggaagtcaacgtatccgctctgggcgatggggaattccgtcttcgt
gcgacgagcagtaatggtacagataaaacgaaactgatttctcaactggagttcaaagca
acaggtctgggtacggcttacaaagatccatacggctttattacaggcggactgtacgat
tacaccaaaggggatgtcggtaacggcaatgagcgaggggtagcgacaagccgggacggg
gagacacatgtgggcttccgcaatatcgatttcgggccgtacggctccgataccattacg
attccaatctttgcgttgtccagtgaagagtacttcattcagatctgggaaggtatgcca
gatgaagagggaagtacactgctggcagatgtggtgtatgacaaagaatccagatggaat
gtgtatcaggaagagacgtatcaactgtccaagcggctgagcgggattacgtcgatctgt
tttgtactgaagcagaagattcatatcaaaggcttctcattcgagcgccaaagccgggca
tttgaacagaatacggctgcatcatgcgatcatctctacggggatacgttcaagatcgag
ggtgatcatgtcgaggggatcggaaacaatgtgtcgttggagtttgaaaatatggacttc
acagcagaaggcacgtccaagcttgtgatctatggacgttcaacaatcgataaaaacacg
atccatatccgctttgcaggtgaggatggacagagcaatcagctggtcgaattcacacag
tccgatggatatgaggagcgagtgtttgagcttgagcaggttaaaggtgtgcagaaggtg
acctttattttcctgccgggtagtcagtttgactttggctggttccggttcgagaagtag
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