Paenibacillus marchantiae: PTQ21_10890
Help
Entry
PTQ21_10890 CDS
T08974
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah02020
Two-component system
pmah02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PTQ21_10890 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PTQ21_10890 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmah03021
]
PTQ21_10890 (rpoN)
Transcription machinery [BR:
pmah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PTQ21_10890 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WDQ34715
LinkDB
All DBs
Position
2412686..2413990
Genome browser
AA seq
434 aa
AA seq
DB search
MLGFQLVQEGRIRLSITPEMKQSIHLLTLSGQELTRYLQEAADENPVLELEEPSTLRTRL
PRRLNQERFSSYDPLLQMKGAEPTLEQLLISQLRLQNLTPAMETTAVYLAGCVNDDGYLP
MELTEVASARGISMPEAEAALDILQSLDPAGVGARNLRECLLLQIRRDPLANQHAEYMVA
KGLEELVRFHPGRAGTRLGISSQQAQAAYDYIACLDPKPCRSIGCTERPHYIIPDAVVQI
RNDELSLRLNSAGVPRVSLNEACYRWIKEIDADEVWSGRAAEARAIIRSVRMRRRTLMRV
LAAIMSEQESFLREGPAGLKPLNLAIIAEAIGMHESTVSRAVNGKYVQTPHGVFELKAFF
ASGLETTNGEMASAPAVKLRLKELIRSERAERPYSDSQLTALLANEGIVISRRTVAKYRE
ELQILPSLERKRWA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttaggatttcagttggtgcaggaggggcgtattcgattatccattacgccggagatg
aagcaatccattcatctgctgaccttgtcgggtcaggagctgactcgttatttgcaggag
gcggcggatgaaaatccggtgcttgagctagaagagccctctaccctgcgcacccgtctt
ccccgacggttgaatcaggagaggttctcctcttatgatccgctgttacagatgaaaggc
gctgaacctacacttgaacaactgttgatatctcagcttcggttgcagaatcttacacct
gcaatggagacaacagctgtatatttggctggttgtgtcaacgatgatggctatctaccg
atggaattgactgaggttgcatcggcaaggggaatatcgatgcctgaggctgaagcagcc
ctggacattctccagtcgctggacccggcaggtgtgggagcgcgcaacttgcgtgaatgc
ttgttgcttcagattaggcgtgatccattagctaaccagcatgcggagtacatggtggcg
aaaggtctggaggagttggttcgtttccacccaggcagagcaggaacaagactagggatt
tcttcacagcaggctcaggcagcctatgactatattgcttgtctagacccgaaaccttgc
agatccatcggttgtacggaacgtccacattatattattccggatgccgttgtgcagata
aggaatgatgaactttctctacgtttaaattcagcgggtgtgccgcgggtatccctgaac
gaagcttgttatcgctggatcaaggagattgatgcagatgaggtatggtcaggccgggca
gcagaggcgagagcgatcattcgcagtgtacgcatgcgtcgccgaactctgatgcgtgtc
ctagctgcaatcatgagcgaacaggaatcttttctgcgtgaaggacctgccggtttgaag
ccgctcaatctggcgattattgcagaggccatcggcatgcatgagtcgacggtgagccgt
gcggtcaatggcaaatatgttcagacaccgcatggtgtctttgaactcaaggcttttttt
gcatcaggtcttgaaacaacgaatggagaaatggcctctgcgccggcggtgaagctcaga
ctgaaagagctgattcgttctgaacgggcggaacgcccatactcggatagccaactcacc
gcattactcgcgaatgaaggcatcgttatctcccgcagaacggttgcgaaatacagggaa
gagcttcagattttgccttcacttgaacggaagcgctgggcatga
DBGET
integrated database retrieval system
