Paenibacillus marchantiae: PTQ21_11480
Help
Entry
PTQ21_11480 CDS
T08974
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pmah
Paenibacillus marchantiae
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmah03016
]
PTQ21_11480 (thpR)
Enzymes [BR:
pmah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PTQ21_11480 (thpR)
Transfer RNA biogenesis [BR:
pmah03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PTQ21_11480 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WDQ34825
LinkDB
All DBs
Position
2543251..2543859
Genome browser
AA seq
202 aa
AA seq
DB search
MNNYLNSHTDLPSRRERLFIALRVPAHIQNSLRMSAEQVQGKLDFRKWTDYRDYHITLQF
LGDILVSDIGQLRKALRSVTAGFQPFELQLSGWGTFGLEEAPKVLWKGVEGETDQLHLLQ
KRIVDATSSLGFEAELRPYSPHITIARKFLGQDPGNEDKGIFKVLPGQFLGVNSWMVQDF
VLYVTQPGQAPMYGVVDMFSFS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaataactatttaaattcacatacggatcttccatcccgacgggaacgattatttatt
gcactccgggtgcctgcacatattcagaattcacttcggatgtctgcggaacaggtgcaa
ggaaagctagattttcgcaaatggacggactaccgggattatcatattacattgcaattt
ctgggagatatccttgttagtgacattggacaacttcggaaagcgctgcgttcggtaacg
gccgggttccagccttttgaactgcaattatccggttggggaacgttcggtttggaagag
gcgccaaaggtgctgtggaaaggtgttgaaggagaaacggatcaacttcatcttctgcaa
aaacggatcgtcgacgcaacttcctcccttggattcgaggccgaattaagaccttattct
cctcatattacgattgcgcgtaaatttctgggtcaggacccaggaaatgaagataaaggg
atatttaaagtgcttccaggacaatttttaggtgttaattcttggatggtgcaagatttt
gtgctttatgtgacacagccaggtcaggcgccgatgtatggggttgtggatatgttttct
ttttcctga
DBGET
integrated database retrieval system
