Paenibacillus marchantiae: PTQ21_13800
Help
Entry
PTQ21_13800 CDS
T08974
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pmah
Paenibacillus marchantiae
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PTQ21_13800
Enzymes [BR:
pmah01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PTQ21_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
WDQ35236
LinkDB
All DBs
Position
2982219..2984117
Genome browser
AA seq
632 aa
AA seq
DB search
MKTEMTVAKGKKVLFTWLLSGVIGLTGLASPGGLAPKAEAAEVSAPRLVEDLGRGLTAVY
LGENQVYLSWRLLGTEPQQATFNVYRRTGTEEVKLNAQPLTQGTNYTDTDVDVNQSHTYI
VKSYVDGTLQGASAEVVLAATPEIRNYFSIPLQNITSNPSDYFVQHGWPGDLDGDGEYEV
VVTRIPVNGGNKYVEAYSLTEGFLWRIDLGPYSVTTIDTYNAPPASVSEFGVAGLGGWRD
NDNITVFDLDSDGKAEVLLRTFEGVTFADGQVVPATVQRAQYVSVVDGLTGTEAARTTIT
NNYAADGPLSGHFGIAYLDGEHPSLITVLKNRALSRNFQYVTSAYDYAGGALTERWRHVG
ADGEFFHQIRILDLDGDGKDEVSFGGWALDDNGETLYSLPGVVHGDRFHITDIDPDRPGL
EQFGIQQAENGNVNQFPWFYADAATGEIIRTGELPQDVARGTLADIDPRHSGLEMWSSSG
NIYNVDGEVISSVQPSTNFKIWWDGDVLGELLDKNFVEKWDWQQDTTTRLFTADDVRVNS
RNAPVLYGDLLGDWREEILYETSDFQELRLYTTTIPSDVRIYTLPHNPAYLNGLAVKGYM
QSLLTDYYLGEGMTTPPYPNIRPAVYNRENES
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgaaatgactgtggcaaaaggaaagaaagtactgttcacatggctattgagt
ggagtcattggattgacaggcttggcttcacccggaggtttagcacccaaggcagaggcc
gcagaagtgtctgcaccacggctggtagaagacctgggacgaggccttactgcggtgtac
ctgggggagaaccaagtctatctgagctggcgtttacttgggaccgaaccgcagcaagct
accttcaatgtctatcgacggacgggcacagaagaggtgaagctgaatgcccagcctttg
acgcagggaaccaactatacggatacagacgtggatgtaaaccagagtcatacgtatatc
gtgaagtcttatgtggatggtactttgcagggtgcaagtgcagaagtagtgctggccgca
acccccgagattcgcaattatttcagtattccgctgcaaaatataacgtccaatccgtcc
gattattttgtccagcatggctggccaggggatctggacggcgatggagaatatgaagtt
gtggtcacccggattccggtgaatggaggcaacaaatatgtggaggcgtacagcttgacc
gaaggtttcctatggcgaattgatctggggccttacagcgtgaccacgatcgatacatat
aatgcaccacctgcttcggtaagcgaattcggtgtggctggactgggcggctggcgtgac
aatgacaatattacagtgtttgatctggatagtgacggaaaggctgaggtactgctgcgt
acctttgaaggtgtgacgtttgccgatggtcaggtcgtccctgctacggtgcagcgcgca
caatatgtatctgttgtggatggattgacgggtacagaagctgcacgtactacaattacg
aataattatgcagccgatggaccgctcagcgggcatttcggtattgcttatctggatggt
gaacatccgagtctgattacggtgctcaagaatcgtgcgctcagccggaatttccagtat
gtgacgtcagcttatgattatgcaggtggagccctaaccgagcgatggagacatgtaggg
gcggacggtgagtttttccaccagattcgtatattggatctcgatggggatggaaaggac
gaggtttcttttggcggctgggcactggatgataatggagagacattatacagtctgcct
ggtgtagtccatggtgatcgattccacattacggatattgatccggatcggccggggttg
gagcagtttggaattcagcaggcagagaacggcaacgttaatcaatttccttggttttac
gcggatgcagcgacgggtgagatcattcgcacgggagaactgccccaggacgtggcaagg
ggaacgctggcggatattgatccacgacacagcgggcttgagatgtggtccagttcaggc
aatatttataatgtggatggtgaagtgatcagttcggttcaaccatcaacgaacttcaaa
atctggtgggatggagatgtgctcggcgagctgctggataagaactttgtggaaaagtgg
gactggcagcaggacacgacgacacgtctgtttacagctgatgatgtgcgtgtgaattcc
agaaacgcccctgtactctatggggatctgctcggggactggcgggaggaaattctgtat
gagacgagtgatttccaagaattgcgtctgtacacaacgacaataccgtcggatgtacgc
atctacacactgccgcataatccggcataccttaacggactggctgtcaaaggatatatg
cagtctttgctaaccgattattatctgggtgaaggaatgacaacaccaccgtatccgaat
attcgccctgccgtgtacaatagggagaacgagtcttaa
DBGET
integrated database retrieval system
