Paenibacillus marchantiae: PTQ21_14850
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Entry
PTQ21_14850 CDS
T08974
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03030
DNA replication
pmah03430
Mismatch repair
pmah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTQ21_14850
03430 Mismatch repair
PTQ21_14850
03440 Homologous recombination
PTQ21_14850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmah03032
]
PTQ21_14850
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_14850
Enzymes [BR:
pmah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTQ21_14850
DNA replication proteins [BR:
pmah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTQ21_14850
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTQ21_14850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Herpeto_peptide
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WDQ35430
LinkDB
All DBs
Position
3213667..3217764
Genome browser
AA seq
1365 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARIPDLVNKAADLGMTTLALTDHGVMYGAIPFYKACVERGI
KPIIGCEAYMTAGSRKERGSRKDQPIHHLILLAKNMTGYQNLMKLCSIGHLEGFHYKPRI
DMESLAAHHEGIICLSACLGGEVPQHLLHGREEEAKRAALRYKNIFGADFYLELQDHGLS
EQKRVNPQLIRLAAELDIPLVATNDAHYLSEEDAELQDVLICIGTGKTVDDENRLRIGTN
QLYLKSEQEMARLFPHVPEALANTVRIAESCELQLEFGKSILPEYRPLPEGKSPSTYLRQ
LCEEGMEERYSESSRWTDSELRAALEQRLDYELRVIDSMGFSDYFLIVWDFIAYSHQQGI
VTGPGRGSSAGSLVAYTLRITDVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVIE
YVAKKYGKAHVAQIITFGTMAARAAVRDVGRALNVPYGEVDKAAKLIPAQLGINIQRAME
ATPELKALYETKPKTRELLDMAMKVEGMPRHASTHAAGVVISRDPLTDAVPLQEGSEGTA
LTQYSMENLESIGLLKMDFLGLRTLSIIERCLRWIGENGEIPDFRHIPDDDALTYEMLGR
GDTMGIFQLESAGVRRVLKELKPSVFEDIISVLALYRPGPMEFISKYIQGKHGQIEVDYP
HADLESILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERGHFVQ
GSLKQGYSEAEADLVYDMIVKFANYGFPRAHAAAYGVLAFQTAYLKAHYPIHFMASMLTA
VMGSHRKVAEYVVECRRMDIEVLPPDVNESGILFTPVLGSSNRTKAGQAAETQRLEGEHG
EDGTASSTMEHAIHVDDHYSGQAEYGEAPLPDDPGPSPDEDGSAYEWQAATAVPEQSEDR
INSGVVTVSTAERLHGTGEEESSHSEQHEMSAVQEKDGLSNQNSDADTATGAIRFGLAAV
KNVGTQAMESIMIVRQERPFDSLLDFCRRVDLRVCNKRVIESLIQAGAFDTLPGHRAQLL
AMLDETVEAALKWRKEREDLQIQLFDFVETPNWEIEYPQIPPYSGSQQLELERELLGLYL
SGHPLDDYEDVLESSGADRIMELTEAADDTMAVAAGMVVSVKSITTKQGKAMAFMELEDQ
IERCEVVLFPEVWRRSQQHVGKGELLVVRAKVQQQDEGFKLLAEEVAPLSPAALEQQLRS
RERRGKPGGGSASRPAAPPRQASGAGAVAARSSAGVNAGAQRSSGGQGPAASHSAGGGSG
AADANGAASVARRAPEAASGTEQSRGPRVAEQRVFVKITPQSEKPELLARLKQLLQQHSG
PVATVLFYEQQQKLLALSDAYRIKPSPSLFSEMEKMLGEGTVKIK
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttttgtgcatttgcacgttcacagtgaatatagtttgctggacggcgctgcg
cgtataccggatctcgtgaataaggccgcggatctcggaatgactacgctggcattgacc
gaccacggtgtaatgtatggtgctattcctttctataaagcatgcgtcgagcggggaatt
aagccgatcattggatgtgaggcttatatgactgccgggtctcgcaaagagcggggaagc
cgcaaggatcagccgatccatcatctgattttactagccaaaaatatgacgggttatcaa
aatctgatgaaactatgctccatcggacatttggaaggcttccattacaaaccacgtatt
gatatggagagtctggctgcccatcacgagggtatcatctgtttaagtgcatgtctggga
ggcgaggttccccagcatctgctgcatggacgagaggaagaggcaaagcgtgcggcgctg
cgttacaaaaatatttttggtgccgatttctatctggaactgcaggatcatgggctatct
gagcaaaaaagagtgaaccctcagctgattcgtctggcagcagaactggatattccattg
gtggcgactaatgatgcgcattatctgtccgaagaggacgctgagcttcaggatgtgttg
atctgcatcggaacagggaaaacggtagatgacgagaatcggctgcgcattggaaccaat
cagctctatctcaagagtgaacaagaaatggcgcgtttgttcccacatgtgcccgaggct
ttggcgaatacggttcgcatcgcggagtcatgtgagttgcagctcgaattcggcaaatcc
attttgccggagtacagaccgcttcctgaagggaaaagtccttctacctatctgcgtcag
ttgtgcgaagagggaatggaagagcgctatagtgaatcatcacgttggacggactcggag
ctcagagccgcacttgaacagcggctggattatgagctccgggttatagacagtatggga
ttctcggattattttctgatcgtgtgggattttatcgcctattctcatcagcagggaatt
gttaccggaccgggacgtggctcctcggcaggtagtctggttgcctataccttgcgtatt
acagacgttgatcccatgaagtataacctgctcttcgagcggtttttgaatccggaacgg
atctccatgccggatattgatatcgacttcagcgatgaacgtagggacgaagtcattgaa
tatgtggcgaaaaaatatggcaaagcccatgtcgcccagatcattacctttggtacgatg
gctgcccgtgcagccgttcgggacgtcggacgtgcactgaatgtgccttacggcgaggtg
gacaaggcagcgaagctgattcctgcacagcttggtattaacattcagcgggcaatggaa
gccacccctgaactaaaggctttgtatgagaccaagccgaaaacacgtgaattgctcgat
atggccatgaaggtggaaggtatgcctcgtcatgcttccacacatgcggcgggggttgtc
atctcccgtgatccgctgacggatgctgttccgcttcaggagggcagtgagggaacggcc
ttaacgcaatattccatggaaaacctggagtctattggactgctcaaaatggacttcctc
ggtctgcgtaccctttcaattattgaacgctgtctgcgctggattggggaaaatggcgaa
attccggattttcgtcatattccggatgacgacgcactcacatatgagatgcttggtcga
ggcgacacgatggggatattccagcttgaatccgcaggagtgcgtcgtgtcctgaaggag
ctgaagccaagtgtatttgaagatattatttccgtgctggccttgtatcgtccgggccca
atggaattcatctccaaatacattcagggcaaacatggacagatcgaagtggattacccg
catgcggatctggagtccatcctcaaggatacgtacggcatcattgtatatcaggaacaa
attatgcagattgcttcccggatggcgggcttctctctcggcgaagcggatttgctccgt
agagcggtttccaagaagaaacgggaagtactggatctcgaacgtggacattttgtccag
ggcagtcttaagcaaggatacagtgaagcggaggcagacctggtctatgacatgatcgtc
aagtttgccaactacggtttcccgcgtgctcatgccgctgcgtatggcgtgcttgctttc
cagacggcttatctgaaagcacattatcccattcattttatggcatcgatgttaacagcc
gttatgggcagtcaccgcaaagtagcggagtacgttgtggaatgccgtcgcatggatatt
gaagtacttccaccagatgtgaatgagagcggcattctgtttacacctgtacttggatca
tccaacagaacaaaggctggacaagcggcggaaacccaacgtttagagggagaacatggg
gaggacggtacagcaagttctacgatggaacatgccatacatgttgatgatcattattcc
ggacaagcggagtacggtgaagcacctctaccagatgacccgggtccctcaccagacgaa
gacggtagtgcctatgagtggcaggcagcgacggctgtgccagagcagtccgaggatcgg
attaattcgggcgtagtgactgtttctacagcagaacgtctgcatggaactggggaagag
gagtcctcgcattctgaacagcatgaaatgtctgctgtacaggagaaagatggattgtcg
aatcagaactctgatgcagatacagcaaccggggcgatacgtttcggtctggctgcggtg
aaaaatgtaggcacccaggcgatggaaagtattatgattgtacggcaggaaagaccgttc
gacagtttgctcgatttttgtcgtcgcgtcgatttgcgggtatgcaacaaacgtgtaatt
gaatcgcttattcaggcgggagcctttgacacattgcctgggcaccgtgcccaattactt
gccatgctggatgagactgtggaagcggctttgaaatggcgcaaagaacgcgaggatctg
caaattcaattgtttgattttgtcgagacgccgaactgggagattgaatatcctcaaatt
ccgccttattccgggagtcagcaattggagttggaacgtgagctgttaggtttgtatcta
tctggtcatccattagatgactatgaagatgtgcttgaatccagcggcgcagatcgcatt
atggagctgacggaagcggctgacgatacgatggccgtggcagccgggatggtcgtgtct
gtgaagtcgattacgacgaaacagggcaaggctatggcgttcatggagttggaagaccag
attgaacgctgtgaagtggttctctttcccgaagtatggcggcgcagccagcagcatgtc
gggaaaggtgaactgctcgtcgtgcgcgccaaagtgcagcagcaggacgaagggttcaag
ctgctggctgaggaagtggcgccgttgtcaccggcggcactggaacagcagctgcgcagc
cgcgaacggcgcggcaagcccggcggcggcagtgcttcgcgcccggcggctccgccacgg
caggcgagcggcgcgggagccgtagctgcacgcagcagcgcaggcgtgaatgctggagct
cagcgcagcagcggaggccagggtccggcagcgtcgcacagcgctgggggtggatctggg
gcggccgatgccaatggggccgcttccgtggctcgtcgggcccctgaggccgctagcggc
acggagcagagtcgtgggccacgagtggcggagcagcgggtgttcgtgaagatcaccccg
cagtcggagaagcccgagcttctggcccgactgaaacagttgcttcagcagcattcgggc
ccggtggcgacggtgctcttctatgaacagcagcagaagctgctcgcattgagtgatgcc
taccggattaaaccttcgccctctttgttctccgagatggagaaaatgctgggtgagggc
acggtcaaaataaaataa
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