Paenibacillus marchantiae: PTQ21_17850
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Entry
PTQ21_17850 CDS
T08974
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03030
DNA replication
pmah03430
Mismatch repair
pmah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTQ21_17850
03430 Mismatch repair
PTQ21_17850
03440 Homologous recombination
PTQ21_17850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmah03032
]
PTQ21_17850
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_17850
Enzymes [BR:
pmah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTQ21_17850
DNA replication proteins [BR:
pmah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTQ21_17850
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTQ21_17850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WDQ30314
LinkDB
All DBs
Position
3867339..3868031
Genome browser
AA seq
230 aa
AA seq
DB search
MKIAFMPDTYTVEELKVPNSQDRMYCIIDLEGTGINPAEESVTQFGAMNYKKGESLDSTF
TSLVRASRPIPEAVTKLTGISNEDMIQAPSFAEAYQAFLEFIGDKVLVTQAGYEYDLPIL
KRHCDMNGLMMFSNPVLDTKAMFTYIHPEISEVISTDFLIRYYELNTDGIHRHNALADCG
VIARIFEHVLNEYQALELDHFTADGKHVMKRFVIPEMYLTASNGGGKPDE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcgtttatgccggatacgtacactgttgaagagctaaaagtccctaactcg
caagataggatgtactgcataattgatctagagggcacaggaattaacccggcagaggag
agtgtgacccaatttggtgcaatgaactacaaaaaaggagaatcattagattcaacgttc
acttcacttgtacgcgcctctaggccgattccggaagcggtcacgaagttaacgggtatt
tcaaatgaggatatgatccaggctccctcatttgcagaagcataccaggcttttctggaa
ttcatcggggataaggtattagtcacgcaggcgggttatgagtatgatttgcccatattg
aaacgacattgtgatatgaatgggctgatgatgttttccaatccggtgttggatacaaaa
gcgatgtttacatatattcatcctgaaatctccgaggtcatctctaccgatttcctgatc
cggtattatgaactgaatacagacggaattcacaggcacaatgccttggccgattgtggt
gtgattgctcgtattttcgaacatgtcctgaatgaatatcaggctcttgaattggatcat
tttactgcggatgggaaacatgtgatgaagcgttttgtgattcctgagatgtatttgaca
gcgtcgaatggaggagggaagccagatgagtag
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