Paenibacillus marchantiae: PTQ21_26030
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Entry
PTQ21_26030 CDS
T08974
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PTQ21_26030 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_26030 (xseA)
Enzymes [BR:
pmah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PTQ21_26030 (xseA)
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PTQ21_26030 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Beta-barrel_RND_rel
Motif
Other DBs
NCBI-ProteinID:
WDQ31814
LinkDB
All DBs
Position
complement(5780044..5781408)
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AA seq
454 aa
AA seq
DB search
MADQKIYSIKDLNRYIRMKLESDQVLSDVWLRGEISNFTHHSSGHMYFTLKDKDSRIKSI
MFASHNQRLPFVPKEGARVIARGNVSVYERDGQYQFYATHMQPDGIGSLYLAYEQLKKKL
EDEGLFSTSRKRQIPRFPQTIGVVTSPTGAAVRDIMITLQRRYPSAQVILYPVLVQGKGA
APSIVKAINNLNRMGEADVLIVGRGGGSLEELWAFNEEIVARAIVGSAIPVISAVGHETD
FTIADFAADLRAATPTAAAELAVPNRAELLDQIAQRQRQLQHSLRQRAVHNRERLARLQR
SPVLVHPRRTLMQHTERLDMLQQRLLRTVDTRMKWTTEKQERLRAALQRFNPREQVNAAR
RENASARRQLEVAIRSIARAKQQQWKSSVRHLDALSPLKVMSRGYSLVYDEQEQRLIKSM
KDVQPGDSIKIKLTDGQLDCQVWGMKEDDNTHGE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcaaaagatctattccatcaaagacctgaaccgatacatccggatgaagcta
gaatcggatcaggtactgtcggatgtatggctgcgcggagagatctccaattttacacat
cactccagcggtcatatgtattttacattgaaggacaaggacagccgaattaagtccatt
atgtttgcttcccataatcaacgattgccctttgtaccgaaggagggtgcaagggttatt
gctcgtggtaatgtctcggtgtatgagcgggatggacaatatcaattctacgctacacac
atgcaaccggacggtattggaagtctgtacttggcctatgagcagttgaaaaaaaagctg
gaggacgagggactgttctctacatcacggaaaaggcagattccccgttttccacagacg
attggtgtggtaacctcacctacaggtgcagcggtaagggatatcatgattacattgcaa
cgcagatatccttctgcccaagtgattctgtatcctgtactcgttcaaggtaaaggtgca
gctccttccattgtgaaggccatcaataacctgaaccgaatgggtgaagccgatgtgctg
attgtcggacgaggcggcggatcactggaagagctgtgggctttcaatgaggagatcgtg
gcaagagcgattgtgggttcggccattccagtgatatcagccgttgggcatgaaacggat
tttacgattgccgattttgctgctgatctacgtgcggcaacacctacggctgctgccgaa
ctggcagtacccaatcgagctgagctgcttgatcagatcgctcagcgccagcgtcagctg
cagcacagtttacgtcagcgtgctgttcataatcgcgagcgactggccagattgcaacgc
tcacctgtgcttgtgcatcccagacgtaccttaatgcagcatacggagcgactggatatg
ctgcaacaacgtcttctgcgaactgtagatacacgtatgaaatggacaaccgagaaacag
gaacgtttgcgtgcagcgctgcagcggttcaatcctcgtgaacaggtgaatgcagcaaga
cgggagaatgcatcagcccggcgtcaactggaggttgcaatccgatccattgcgagagcg
aagcagcagcagtggaaatcatctgtacgtcatttggatgcgcttagcccgctcaaagtt
atgtcacgcggatacagccttgtctatgacgaacaggagcaacgattgatcaaatcgatg
aaggatgtacagcctggagattcgataaagattaaattaacagacggacagttggactgt
caggtttggggaatgaaggaggacgacaatacccatggcgaatga
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