Paenibacillus marchantiae: PTQ21_26665
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Entry
PTQ21_26665 CDS
T08974
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03022
Basal transcription factors
pmah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PTQ21_26665
09124 Replication and repair
03420 Nucleotide excision repair
PTQ21_26665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmah03021
]
PTQ21_26665
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_26665
Enzymes [BR:
pmah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTQ21_26665
Transcription machinery [BR:
pmah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PTQ21_26665
DNA repair and recombination proteins [BR:
pmah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PTQ21_26665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
HSR
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WDQ31935
LinkDB
All DBs
Position
complement(5922286..5923962)
Genome browser
AA seq
558 aa
AA seq
DB search
MEKTDACIVQRDFTVLLEVGHPGFDQARAQLGMYAELVKTPAAFHTYRITALSLWNAAAL
GWSADQVIESLESVSRWNVPAALIQDIQRIIHQYGKLQLKPQADHGRMRLVSEDERLLDE
LSSMKTISAFRMERVDPHELILGGEQRGLLKRELTRLGYPVLDYAGYREGTSLPFEWQAN
TLGEGLDGFQLRPYQRDAVDAFEGSEGMGGSGLLVLPCGAGKTVIGMAVLKRLQCECLIL
TSNTTSVRQWIQELQDKTTITNEQIGEYSGQKKQVKPVTVATYQILTHRKSKEADFTHIK
LLSERQWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGCEQDVFSLIGPKLY
DMPWKELEQQGWIANVQCQEIRIPFTPELRSNYLEAEVKHQFRLAAENPAKLAVIRRILD
HHEGMPALVIGQYLDQLESIAREIEAPLISGTMSQQERVKWFAAFRRGEIKTIVVSKVAN
FAVDLPDAAVALEISGSFGSRQEEAQRLGRILRPKSGENKAYFYALVSEDSKEQEFALRR
QMFLVEQGYEYKIVHELQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacggacgcctgcattgtccagcgtgattttacagtattgcttgaagtgggt
catcctggatttgatcaggccagagctcaactagggatgtatgccgaactggtgaagaca
cctgcggcttttcatacatatcgcatcactgcattatcactgtggaatgccgctgcactc
ggctggagtgctgatcaagtgatagaaagtctggaatcagtgtctcgttggaatgttcct
gccgccctgattcaagatatccaaagaattatccatcaatatgggaagttacaattgaag
ccacaggcagatcacgggagaatgcgtctcgtgagtgaagatgaacgattgctggatgaa
ttaagcagtatgaagaccatctcggcttttcggatggaacgtgtcgatccccatgagctc
atacttggcggtgagcaacgcggattgctgaagcgtgaactaactcgtttgggttatccg
gtgctggattatgcgggatatcgagaaggaacaagtcttccgtttgaatggcaagcgaat
acgctgggcgaaggtttggacggcttccagttgcgcccgtaccaacgagatgctgtggat
gcttttgaaggtagcgaaggcatgggaggcagtggcctgcttgttcttccctgcggtgca
ggcaaaacggttattgggatggccgtgttgaaacgtttgcaatgtgagtgccttatctta
acatcgaacaccacatccgtgcggcaatggattcaggaactacaggataaaacaacgata
acgaatgaacagattggtgagtattccggtcagaaaaaacaggtgaaacctgtgaccgtg
gcaacttatcagattcttacacatagaaaatcgaaagaagctgattttactcatatcaaa
ttgctaagtgaacgccagtggggactcatcatctatgatgaggtccatctgcttccagca
cctgtatttcgtgctacagcagatattcaggctacaagaagactgggattgacagcaaca
ttggtgcgtgaggatggctgtgaacaggatgtattttcgctaattggtccgaaactatat
gacatgccgtggaaagaattagaacagcaagggtggattgcgaatgtacagtgccaggaa
atacgcattccgttcactcctgaactacgatcaaactatttggaagcagaggtgaagcat
caatttcgccttgcagccgaaaatccggccaaattagctgtgatcagacggatattggac
catcatgagggaatgccagcgcttgtaataggacagtatctggatcagcttgagagcatt
gcccgggaaattgaagcgccgctcatatcgggtacgatgtcccagcaagagcgagtgaaa
tggtttgcagcgttccggcgtggtgagatcaaaacgattgtcgtatccaaggttgccaat
tttgccgtagacctgccggatgctgctgttgcacttgaaatatccggcagtttcggttca
aggcaggaagaagcccagcgattgggtcggattctaaggcctaagtccggagaaaataaa
gcttatttctatgcccttgtatcggaggacagtaaggaacaggagtttgcattacgccgt
cagatgtttctggtcgaacaaggttatgagtacaaaatcgttcatgaattgcaatga
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