Paenibacillus marchantiae: PTQ21_27365
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Entry
PTQ21_27365 CDS
T08974
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah00470
D-Amino acid metabolism
pmah00550
Peptidoglycan biosynthesis
pmah01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PTQ21_27365 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PTQ21_27365 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmah01011
]
PTQ21_27365 (murD)
Enzymes [BR:
pmah01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PTQ21_27365 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmah01011
]
Precursor biosynthesis
Amino acid ligase
PTQ21_27365 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
2-Hacid_dh_C
TrkA_N
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
WDQ32060
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Position
complement(6055543..6056964)
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AA seq
473 aa
AA seq
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MNHPESYRGQQVVVLGLAKSGVQVAKVLDRAGAIVTVNDKKEREQCPEASELEALGISVV
CGGHPDDLIHSDVKLVVKNPGIPYQAPPVQQALALGIEVVTEVEVAYHLCAAPMIGITGS
NGKTTTTTWVGNMLELAGLKPIVAGNIGTPLCEAAEQASADNWMVVELSSFQLKGTSDFR
PRIASLLNVAETHLDYHGDMDDYVASKAKLFSNQQPEDVAILNWDDPVCRGLVPYIKARL
LPFSLTEKLEAGVYADPPYVDGEEDDVKRQVIYADGEGNHHVIIDVEDIGIPGRFNVGNA
LAAVAIAVSAGADPSVLAAPLADFKGVEHRLEYVLEHNGANYYNNSKATNSKATVMALNS
FKEPVVLIAGGLDRGSDMMELLPLFQERVKAVVALGETREKIAKVAELAGLKQIKVVDNE
EDAARTLTAAVQEASQFAAPGDVVLLSPACASWDMFASYEERGRIFKEAAHNL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcctgaatcatatcgtggacaacaagtggtcgtgcttggactggccaaaagc
ggcgtgcaggtcgccaaagtactggatcgtgccggcgcaatcgttacagttaatgataaa
aaagagagagaacagtgtcccgaagcatccgaattggaggctttgggaatttctgttgta
tgcgggggacatccggacgacctgattcatagtgatgtgaagcttgtagtcaaaaatccg
ggcattccttatcaggcacctcctgtgcaacaggcacttgccttaggcatagaagtggtg
actgaggtggaggtagcttaccatctatgcgctgcgcctatgatcgggatcacgggctct
aacgggaaaacaaccacaacaacgtgggtaggcaacatgttggagcttgccggtttgaaa
ccaatcgttgccggtaatattggaacgccattgtgtgaggcggcagagcaggcttctgcg
gataactggatggtggtggagcttagcagtttccaactgaaaggcacatccgatttccgt
ccacgcattgcaagtttgctaaacgtggcggagactcatttggattaccatggggacatg
gatgattatgtggcttccaaagccaaattgttctccaaccagcaaccggaggatgtagct
atcctgaactgggatgacccggtatgtcgcggactggttccttatattaaagcaagactg
ctcccattctcgctgacagagaagcttgaagcaggggtatatgccgatcctccatacgtg
gatggggaagaggatgatgtgaagcgccaggtgatctatgcagacggtgagggcaaccat
catgtcattattgatgtggaagacatcggaataccaggacgatttaatgtgggaaatgca
ttggcagcagtagctattgctgtctccgctggagccgatccatctgtgcttgctgcgcct
ctggctgacttcaagggggttgaacaccgtcttgagtatgtacttgaacataatggagct
aactattacaacaattccaaagcgactaactccaaagcaaccgtaatggcgttgaactcc
ttcaaggaaccggtcgtgctcattgccggcggactggatcgtggatcagacatgatggaa
ttgctgccattgttccaggagcgggtgaaagctgtggttgctcttggagagacacgggag
aaaattgccaaggtcgcggaactggcgggattaaagcaaattaaggtcgtcgataatgag
gaggacgctgcccggacgttaaccgctgccgtgcaggaagcttcacagtttgcagctcca
ggtgatgtggtcttgttatcaccagcgtgtgcaagctgggacatgtttgcttcctatgaa
gagcggggacgcatttttaaagaggcggcgcataacttgtaa
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