Paenibacillus marchantiae: PTQ21_27815
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Entry
PTQ21_27815 CDS
T08974
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pmah
Paenibacillus marchantiae
Pathway
pmah03030
DNA replication
pmah03430
Mismatch repair
pmah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTQ21_27815 (holA)
03430 Mismatch repair
PTQ21_27815 (holA)
03440 Homologous recombination
PTQ21_27815 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmah03032
]
PTQ21_27815 (holA)
03400 DNA repair and recombination proteins [BR:
pmah03400
]
PTQ21_27815 (holA)
Enzymes [BR:
pmah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTQ21_27815 (holA)
DNA replication proteins [BR:
pmah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTQ21_27815 (holA)
DNA repair and recombination proteins [BR:
pmah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTQ21_27815 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Sigma70_r4_2
YdfE_C
Motif
Other DBs
NCBI-ProteinID:
WDQ32143
LinkDB
All DBs
Position
complement(6159326..6160342)
Genome browser
AA seq
338 aa
AA seq
DB search
MDVKSATKAIRNGETAPVYVLYGTEKYQIQQFTDMLKQQVIEEEHREFAIIPYDLSETPV
EVVIEEAETVPFLVPRKLIIVRDANLFTAGKDSKMDHQIDRLLTYMDNPADYSIIVFLAQ
GDKLDERKKLVKAAKKQAVVLAFAPLSGEELLGWIVKLAKQRDVSFETGAADTLVSYAGT
GLQTLSAEVDKLCLFAGNGGTIKRADIESLVARSTEQNVFALVEELANLRLEKALGLFYE
LLKQREEPIKIAALIARQFRIMIQVKELGQQSYSQQQIASQLGLHPYAVKIAGEQARKFQ
AERLRLILSHLSELDYQMKTGAVDKVLGLELFLLRLGA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaagagtgcgacaaaggcaatacgtaatggagaaacggctccggtatatgtg
ctgtacggaacggagaagtaccagatacagcaatttacggatatgttaaaacaacaggta
attgaagaagagcaccgagaatttgcgatcattccatatgatctctctgagacacctgtg
gaggtggtcattgaagaagcggagacggttccttttcttgttccacgtaaactcattatc
gttcgcgatgctaatttgtttacagcaggcaaggattccaaaatggatcaccagattgat
cggctgcttacatatatggacaatccggcagattatagtattattgtgtttctggcccaa
ggggataagctggatgagcgtaaaaaactagttaaggcagccaagaaacaagccgttgtc
cttgcgttcgctccactaagtggtgaagagctgctgggttggattgtaaagctggcgaag
caacgggatgtatcttttgagactggagcagctgacacgcttgttagttatgcaggaaca
ggcttgcagacgttatctgcggaagtggacaagttgtgtttgttcgctggtaacggaggc
acgattaaacgcgcagatatcgaatctttggtggcgcgaagtaccgagcagaatgtgttc
gcgttggtggaggagcttgctaacttgaggctggagaaagcgttgggtcttttttatgag
ttgctgaagcagcgtgaagaaccaatcaaaattgctgccttgattgcccgtcaatttcga
attatgattcaggtaaaggagttagggcagcagagttactcccaacagcagattgccagt
cagcttggtctgcatccgtatgctgtcaaaattgctggtgaacaggctcgcaagtttcag
gcagaacgtttgaggctaattctgagtcatctcagtgaactggattatcagatgaagacc
ggggcagtggataaagtgctcggactagagcttttcttgttaaggctcggtgcttaa
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