Paraphotobacterium marinum: CF386_00945
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Entry
CF386_00945 CDS
T05093
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CF386_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_00945
Enzymes [BR:
pmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CF386_00945
DNA repair and recombination proteins [BR:
pmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CF386_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
ASK77751
UniProt:
A0A220VBU9
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All DBs
Position
large:176817..177623
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AA seq
268 aa
AA seq
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MKVISFNINGIRARLHQLEALIKKHEPDVIGLQEIKVHNDSFPVEAIENMGYYPDFNGQK
AHYGVAFLSKKKPIKSIHSFPSDDGNEQKRIIIHTYDFNGKEVTIINGYFPQGENIKHET
KFPLKRKFYADLNNHLEEYHTASDNLIVMGDINISPTNLDIGIGEPNAKRWLRTGKTSFQ
PEEREWLEKLQSWGLYDSFREKYPDVDDKFSWFDYRSKGFLDNRGLRIDVLFVTKSMLNI
LNDSGIDYELRGIDKPSDHAPVWSTFNL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattagttttaatatcaatggtatacgagctagacttcatcaattagaagct
ctaattaaaaaacatgagcctgatgtaattggtcttcaagaaatcaaagttcataatgac
tcttttcccgtagaagccatagagaatatgggatattatcctgattttaatggccaaaaa
gctcattatggagttgcctttttaagcaagaaaaaacctataaaatcaatacatagcttc
ccaagtgatgatggcaacgaacaaaaaagaataattatccatacctatgattttaatgga
aaagaagtaacgattattaatggatatttccctcaaggtgaaaatattaaacatgaaacc
aaatttccattaaaacgaaaattttatgctgatctcaataaccacttagaagaataccat
acggcaagtgataacttgattgtgatgggtgatattaatattagtcctacaaatttagat
attggaataggcgaaccaaatgcgaaaagatggctacgtacaggcaaaacttcttttcaa
cctgaagaaagagaatggttagaaaaacttcaatcttggggcttatatgattcctttaga
gaaaaatatcctgatgtggatgataaattctcttggtttgactatcgttcaaaaggtttt
ctagataatcgaggattaagaatagatgtattgttcgttactaaatcaatgttaaatata
ttaaatgattctggaattgattatgaacttcgtggaatagacaagccctctgatcatgct
cctgtttggagtactttcaatttataa
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