Paraphotobacterium marinum: CF386_02920
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Entry
CF386_02920 CDS
T05093
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmai03021
]
CF386_02920 (rpoH)
Transcription machinery [BR:
pmai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CF386_02920 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
QueF_N
GntR
UPF0231
Motif
Other DBs
NCBI-ProteinID:
ASK78072
UniProt:
A0A220VD19
LinkDB
All DBs
Position
large:complement(531226..532083)
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AA seq
285 aa
AA seq
DB search
MTKDIHSLALISSDSLESYLQSVNNYPMLSAEEEKKLAERLYNDGDITAAKDLIMSHLRF
VAHVARGYKGYGLPMSDIIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLKN
WRIVKVATTKAQRKLFFNLRKNKLKLGWFSKEEVNMVANQLGVDESEVLEMESRLSALDY
SFDLPNDNDDTKPQSNSPVFYLEDKSSDLAKDFESNNWESNANEKLAKAMKTLDERSQHI
IKTRWLDDDKVTLQDLAKFYNISAERVRQLEKSALKRLKGAVGEL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagatatacattcattggctttaatatcttcagatagccttgaaagttattta
cagtcagtaaataattacccaatgctttccgctgaagaagagaaaaaacttgcggaaaga
ttgtataatgatggtgatattactgcggcaaaagatcttatcatgtctcaccttaggttc
gtggctcatgttgctagaggttataaaggttacggcttgccgatgtctgatattatccaa
gaagggaatgttggactgatgaaggctgttaagagatttaatcctgaggttggtgttaga
ctggtatcttttgctgtacattggataaaggctgaaattcacgaatatgtgttgaaaaat
tggcgtatagttaaagtcgcaacaaccaaagcgcaaagaaaactatttttcaatttaaga
aaaaataaattaaaactaggttggtttagtaaagaagaagtaaacatggttgcaaatcaa
cttggtgtagatgaatcggaagtattagaaatggagtctagattatcagctttagattat
tctttcgatttacctaatgataatgatgatacaaagccacaatctaattcaccagttttt
tatttagaagataaaagttcagatttagctaaagattttgagtctaataactgggaatca
aatgcaaatgagaagttagcgaaagcaatgaaaactttagatgaaagaagccagcatatt
attaaaacacgttggcttgatgatgataaagtcacattacaagatctcgctaagttctat
aatatttctgcagaaagggtgcgacagttagaaaagagcgctttaaaacgtctcaaagga
gcagttggagagctctaa
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