Paraphotobacterium marinum: CF386_04025
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Entry
CF386_04025 CDS
T05093
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CF386_04025 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmai03019
]
CF386_04025 (groL)
03110 Chaperones and folding catalysts [BR:
pmai03110
]
CF386_04025 (groL)
03029 Mitochondrial biogenesis [BR:
pmai03029
]
CF386_04025 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmai04147
]
CF386_04025 (groL)
Enzymes [BR:
pmai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CF386_04025 (groL)
Messenger RNA biogenesis [BR:
pmai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CF386_04025 (groL)
Chaperones and folding catalysts [BR:
pmai03110
]
Heat shock proteins
HSP60 / Chaperonin
CF386_04025 (groL)
Mitochondrial biogenesis [BR:
pmai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CF386_04025 (groL)
Exosome [BR:
pmai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CF386_04025 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CF386_04025 (groL)
Exosomal proteins of breast cancer cells
CF386_04025 (groL)
Exosomal proteins of colorectal cancer cells
CF386_04025 (groL)
Exosomal proteins of bladder cancer cells
CF386_04025 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Sas-6-like_oligomerization
Motif
Other DBs
NCBI-ProteinID:
ASK78250
UniProt:
A0A220VD74
LinkDB
All DBs
Position
large:748398..750044
Genome browser
AA seq
548 aa
AA seq
DB search
MSAKDVVFGNDARIKMLEGVNLLADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVTVAKEI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIVNEGHKAVAAGMNPMDLKRGI
DKAVSAAVEELKTLSVPCSDNKSIAQVGTISANSDQTVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINKQETGLVELENPFILLADKKVSNIRELLPLLEAV
AKTSRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTAGTV
ISEEIGLELEKVTLEDLGQAKRVNITKDNTTIIDGTGEQDVISARVTQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RVASKLEGLTGDNEDQNVGIRLAMRAMEAPLRQITNNAGDEASVVANNVKAGSGSYGYNA
ATSEYGDMIEMGILDPTKVTRSAIQFAASVAGLMITTEAMITDLPQKDAPAMPDMGGMGG
MGGMPGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaagatgtagtttttggtaatgatgccagaattaaaatgctagaaggtgta
aacctattagctgatgcggtaaaagtaactcttgggcctaaaggtcgtaatgtcgtttta
gataagtcttttggcgctccaactgtaacaaaagatggtgtaactgttgctaaagaaatt
gagctagaagataagtttcaaaatatgggtgctcaaatggtaaaagaagttgcttctcaa
gcaaatgatgctgctggagacggaaccactactgcaacagttttagcacaatctattgta
aatgagggacataaagctgttgcagctggaatgaacccaatggatttaaaaaggggtatt
gataaggctgtttcagcagctgttgaagagctaaagacattatcagttccttgctcagac
aataaatctattgctcaagttggaactatttctgcaaactctgatcaaactgttggaaat
attattgcagaggcaatggagcgagttggtagagacggtgttattactgttgaagaaggc
caagcattacaagatgagcttgatgttgtagagggtatgcagtttgatagaggatatctt
tctccgtacttcattaataagcaagaaactggattagttgaacttgaaaacccatttatt
ttattagcggataaaaaagtatcgaatattcgtgagttattacctttattggaagctgtt
gctaaaacatcacgtccacttctgataattgctgaagatgtagaaggtgaagctttagct
actttagttgttaataatatgagaggtatcgttaaagttgctgcagttaaagcaccgggt
tttggtgatagaagaaaagcaatgttacaagatattgctgtattaactgccggtactgtt
atttctgaagaaattggtttagaactagaaaaagttactttagaagatttgggtcaggct
aagagagttaatattactaaagataatacaactattattgatggtacgggcgagcaagat
gtaatttctgcacgtgtaactcaaattcgtcaacaaattgaagaagccacttcagattat
gacaaagaaaagcttcaagaaagagtggctaaacttgctggtggagttgctgtgattaaa
gttggagctgcaactgaagttgaaatgaaagaaaagaaagatagagttgaagatgctctt
catgcaacaagagctgctgttgaagaaggtgtagttgctggtggtggcgttgcattaatt
cgtgtagcttctaaactagaaggtttaacaggcgacaatgaagatcaaaatgtgggtatt
cgtttagctatgcgagctatggaagcaccacttcgtcaaatcacaaataatgctggtgac
gaagcttcagttgttgcaaataatgttaaagcaggttctggtagttacggatataatgct
gcaacatctgagtatggagacatgatagaaatgggtattttagatcctactaaagttact
cgctctgctattcaatttgcagcatcagtagctggtttgatgatcactacagaagcaatg
ataactgatctaccacaaaaagatgcacctgcaatgcctgatatgggcggtatgggtggt
atgggtggtatgccaggcatgatgtaa
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