Paraphotobacterium marinum: CF386_04630
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Entry
CF386_04630 CDS
T05093
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CF386_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_04630
Enzymes [BR:
pmai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CF386_04630
DNA repair and recombination proteins [BR:
pmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CF386_04630
Prokaryotic type
CF386_04630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASK78342
UniProt:
A0A220VDU9
LinkDB
All DBs
Position
large:880464..881162
Genome browser
AA seq
232 aa
AA seq
DB search
MNVCLNQLPYSWHDFFVKQMNEDYFKKLQNYLISCEENNVPIFPKSSNIFNAFKFTPFNK
IKCCIIGQDPYFLPKMANGLAFSVDDGIEAPRSLKNILKELSSNGFKDENNNLTSWSKQG
VFLLNCILTVEAGKPKSHKNRGWEIFTSEALKLINKEHENIVFLAWGKDAHKICSNILDS
SKNYLIKTSHPSPLGARKKGTDFSAFLGSNCFNNVNEILMKNNIEPINWNLE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttgtttaaatcaattgccatattcatggcatgatttttttgtaaaacaaatg
aatgaagattattttaagaaattgcagaattatttaatctcttgtgaagaaaataatgtt
ccaatttttccaaaatcttcaaatatttttaatgcgtttaaatttacgccttttaataaa
ataaaatgttgtattattggacaagatccatactttttacctaaaatggccaatggactt
gcgtttagtgtagatgatggtattgaagctccaagatcactaaaaaatattttgaaagag
ttatccagtaatggatttaaggatgaaaataataatttaacatcatggtccaaacaagga
gtttttctattgaattgtattttaaccgttgaagcaggtaaacccaaatctcataaaaat
agaggctgggaaatttttacatccgaagcgttaaaacttataaataaggagcatgaaaat
attgtttttctagcatggggtaaagatgcacataaaatatgttcgaatatacttgactca
agtaaaaattatctgattaaaacctcccatccaagccctttaggagcaagaaaaaaagga
actgatttttctgcatttcttggttcaaactgttttaacaatgtaaatgagattttaatg
aaaaacaatattgaaccgattaattggaatttagaataa
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