Paraphotobacterium marinum: CF386_04690
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Entry
CF386_04690 CDS
T05093
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CF386_04690 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmai01007
]
CF386_04690 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmai03016
]
CF386_04690 (lysS)
Enzymes [BR:
pmai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CF386_04690 (lysS)
Amino acid related enzymes [BR:
pmai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CF386_04690 (lysS)
Transfer RNA biogenesis [BR:
pmai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CF386_04690 (lysS)
Prokaryotic type
Other AARSs
CF386_04690 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF1359
DUF5798
Motif
Other DBs
NCBI-ProteinID:
ASK78352
UniProt:
A0A220VDV8
LinkDB
All DBs
Position
large:890653..892146
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AA seq
497 aa
AA seq
DB search
MNTNIDENKLIVERRTKLDKIRSLDETNGHPNAFKPSDFSKDLKEKYNEETKESLEEKNI
LASISGRIMAKRGPFLVIKDHKGLIQAYAPKQVQKDLKEKYLGLDIGDIIGVRGVLHLSG
KGDLYVNMDEYHLLTKSLRPLPEKFHGLSDQELKYRNRYVDLIVNEDSKKTFEIRSQILN
IIRSFLSGKEFLEVETPMLHTIPGGASAKPFKTYHNTLDMDMFLRIAPELFLKRLIVGGF
NRVFEINRSFRNEGISTRHNPEFTMLELYMAYSDYEDVMSLVEELFKVIAHKLSNSLTIH
YGEHQIDLSHFDRISMLDAVKKYNEDNELIQTLSYEMIEKTTILEEIATKLGIKIESFWS
KGQVLEELFAETAEKKLIQPTFITEYPADISPLARRNDQNKFITDRFELFVCGRELANGF
SELNDAEDQASRFQAQVDAMEQGDDEAMHFDHDYIKALEYGLPPTGGLGIGIDRLVMLFA
DKHTIRDVILFPTLRNI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaatatagatgaaaacaagttaatagttgaaagaagaactaagttagataaa
atacgttctttagatgaaacgaatggtcacccgaatgcttttaaaccttctgatttttca
aaagatttgaaagaaaaatataatgaagaaacgaaagaaagcttagaagaaaaaaatatt
ctggcatcaatttctggaagaatcatggctaaaagagggccttttttagtaattaaagat
cataaaggtttaattcaggcatatgcccccaaacaagtgcaaaaagatcttaaagaaaaa
tatctaggcttggatattggcgatattattggagttagaggtgtattacatctatctggt
aaaggagacctttatgttaatatggatgaatatcatttattaacgaaatcattgagacct
cttccagaaaagtttcatggattaagtgatcaagaattaaaatatagaaatagatatgtt
gatttaattgttaacgaagattctaaaaaaacttttgaaataagatcacaaattttaaac
attataagaagttttctttctggtaaagaattccttgaagttgaaaccccaatgttacat
acaattcctggtggtgcctcagctaaaccttttaaaacataccataatacacttgatatg
gatatgtttttgagaatagctccagaattatttctgaaacgattgatagttggtggtttt
aacagagtatttgaaattaatagaagtttcagaaatgaaggtatttcgacgcgacacaat
ccagagtttactatgcttgagctatatatggcttattctgattatgaagatgttatgtcg
ttggttgaggagttatttaaagttattgctcataaattatctaattctttaactattcat
tatggcgaacatcaaatagatctcagtcatttcgatagaattagcatgttagatgctgtg
aaaaaatacaacgaagataatgagttgattcagacgttatcttatgaaatgattgaaaaa
acaacaattttggaagaaatagccactaagctaggaattaaaatagaatctttttggagc
aaaggtcaagtcttagaagagctatttgcagaaactgccgagaaaaagcttattcaacca
acatttataacagaatatcctgcagatatttctcctttagcaagacgaaatgatcaaaat
aaatttattaccgatagatttgaactttttgtttgtggaagagagttagcaaatggtttt
tcagagttgaatgatgcggaagatcaagctagcaggttccaagctcaagttgatgcaatg
gagcagggtgatgatgaagccatgcacttcgatcatgactacataaaagcactggagtac
ggcttacctcctacaggaggacttggtattggaattgatcgtttagtgatgctttttgca
gataagcacacaattagagatgtaattttatttcctactcttcgaaatatttag
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