Paraphotobacterium marinum: CF386_04850
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Entry
CF386_04850 CDS
T05093
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmai03016
]
CF386_04850
Enzymes [BR:
pmai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CF386_04850
Transfer RNA biogenesis [BR:
pmai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CF386_04850
Prokaryotic type
CF386_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASK78379
UniProt:
A0A220VDF6
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All DBs
Position
large:925052..925993
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AA seq
313 aa
AA seq
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MKNANNKRIIDGVLLLDKPKGISSNSALQKIKKLYSAEKAGHTGALDPLATGVLPICLGE
ATKYSSFLLESDKKYKVKAQLGIRTTTSDADGDIVDIRNIDITIDNLKKAIYSFVGKQKQ
MPSIFSALKFEGKPLYYYARKNISVPRKIRDIHVFSIDINEIDLPYIDLSIHCSKGTYIR
TIIDDLGEKLECGAHVVELRRTGINDLEIDEALSLEDIEKQFQEKNDLNDIDKFLKPLDT
LLSKLDVLNLPEHLSEKFLHGQKINLDQLEDRKDLLHDLELYRVYNEANFDLLGVASINN
NIIIPKRVRKNRD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcaaataataaacgaataattgatggagttttgcttttggataaaccaaaa
ggtatttcttcaaattcagcacttcaaaaaataaaaaaactatattctgcagaaaaagca
gggcatactggtgcccttgatcctcttgctacgggagttttgccaatttgtcttggagaa
gcaactaagtactctagttttttacttgaatctgataagaaatataaggttaaagcccaa
ttaggaattagaacaactacttctgatgctgatggagatattgttgatattcgcaatatt
gatattacaattgataatttaaaaaaagcaatttattcttttgtcggtaaacaaaaacaa
atgccctccatattctcagcattaaaattcgaaggaaagcctctttattattatgctcga
aaaaatatttctgttccgagaaaaattagggatattcatgtatttagtatagatatcaat
gaaatcgatctgccttacatagatttaagtattcattgttctaaagggacttacataaga
acgattattgatgatttaggggaaaaattagaatgtggagcacatgttgttgagctaaga
agaactggtattaatgatctggaaattgatgaagcattatctttagaggatattgaaaaa
caatttcaagaaaaaaatgatttgaatgatatagacaaatttttaaaaccgttagacaca
ctattatcaaaactagatgttttgaatcttccagaacacttatctgaaaaatttttgcat
ggacagaaaatcaatttagatcaattagaagatagaaaagatttattgcatgatctggag
ctttatcgtgtttataacgaggctaattttgatttgctaggtgttgcatctataaataat
aatattattattcctaaaagagttagaaagaatagagattag
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