Paraphotobacterium marinum: CF386_04895
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Entry
CF386_04895 CDS
T05093
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_04895
DNA repair and recombination proteins [BR:
pmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CF386_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
GvpD_P-loop
Lon_C
nSTAND_NTPase5
SLFN-g3_helicase
AAA_14
DUF7125
AAA
AAA_22
nSTAND3
ABC_tran
AAA_16
AAA_24
NTPase_1
DacZ_T
Zeta_toxin
AAA_29
Viral_helicase1
DUF5906
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ASK78388
UniProt:
A0A220VD97
LinkDB
All DBs
Position
large:933766..935154
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AA seq
462 aa
AA seq
DB search
MAVNKVKKVFGCSECGTEFPRWQGQCSGCKAWNSISELRVSSSPQVTRNDKLSGFSGMLE
SKIRKLSEIEIEELPRLDSSFDELNRVLGGGFVAGSAVLIGGNPGAGKSTLLLQVACNLS
LNETILYVTGEESLQQVAMRADRLNLPKKKLNILSETSINKICDISNQLRPKLIIIDSIQ
VMYLDDLTSSPGSISQVRESASALTQYAKKNNVIIIMVGHVTKDGSIAGPKVLEHCIDAS
IMLDISDDSRFRILRSHKNRFGAINELGIFAMTEKGMKEVRNPSAIFLTNKNNNTEGSVI
SVLWEGTRSLLIELQALVDTSASSIPKRISVGLDQNRLNLMIAILHKHGNIQIYDQDVYV
NVVGGVKVSETSIDLCLILALVSSLKNKSLPENLVVFGEVGLGGEIRPVSYGQERVREAF
KHGFDIAMMPKANLQKNKPDGLKIIYVDKIEDALSKLIDIIS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaataaagtaaaaaaagtatttggttgctctgagtgcggaacagagtttcca
aggtggcaaggacaatgttctggatgtaaagcatggaactcaattagtgagcttagagtt
agttcttcacctcaagtaactagaaatgataagttatctggtttttcgggaatgcttgaa
tctaaaatacgcaaattatctgaaattgaaatagaggaattacccagattggattcatct
tttgatgaactcaatagagttttaggcggaggctttgttgctggatcagcagtattgata
ggaggaaatcctggtgcagggaaaagtactttacttctgcaggtagcatgtaatttatca
ttaaatgaaacgatattatatgtaaccggagaagaatctcttcaacaagttgccatgaga
gcagatcgacttaatctacctaaaaaaaaattgaatatcctttctgaaacaagtatcaac
aaaatatgtgatattagcaatcaattaagaccgaaattaattatcatagattctatacaa
gttatgtatttagatgatttaacttcttctcccggaagcatatctcaagttagagagtct
gcatcagctttaactcaatatgcaaaaaaaaataatgtcattataattatggtgggacac
gtaactaaggatggctctattgcagggcctaaggtattagagcattgtattgatgcgtca
ataatgctagatatatccgacgattctcgttttagaatcttaagaagccacaaaaataga
tttggagcaatcaatgaattaggaatatttgcaatgactgaaaagggaatgaaagaagtc
agaaacccgtcagcaatattcttaacaaataaaaataataatactgaaggaagtgttatt
tcagttctatgggaagggacacgctctttactaatagaattacaagcactagtagatact
tcagcttcttctattcctaaaagaatatctgttggattggatcaaaatagactcaattta
atgattgctattttacataagcatggaaatatacaaatttatgatcaagatgtttatgtt
aatgttgttggaggagttaaagtaagtgaaaccagcattgacctctgtttaattctggcc
ttagtttcaagtttaaaaaataaatcattaccagaaaatttagtggtctttggggaagtg
ggtttgggtggtgaaataagacctgtttcatatggacaagaaagagttcgtgaagctttt
aagcatggatttgatatagccatgatgcccaaagccaatcttcagaaaaataagccagat
ggcttgaaaatcatttatgtagataaaatagaagatgctttaagtaaattgattgatatt
attagctaa
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