KEGG   Paraphotobacterium marinum: CF386_05805
Entry
CF386_05805       CDS       T05093                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pmai  Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:pmai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmai03016]
    CF386_05805
Enzymes [BR:pmai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CF386_05805
Transfer RNA biogenesis [BR:pmai03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CF386_05805
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: ASK78554
UniProt: A0A220VDS8
LinkDB
Position
large:1110632..1111423
AA seq 263 aa
MISYTLIENELELEKSCLLLRDAPILMIDTEFVKTRTFFASLSILQIFDGKNLYIFDAIK
IKNLDLLWLTLSNPDIKKVFHSSSEDLDIIVHLSPYDITNIVDTQIMAVFLGLGLSVGFS
KLCSQLLNIDIDKSESRSNWLHRPLSESQLRYAASDVYYLYPIYQRLNHLSIERKLDGLI
LIECNRLLEAKKQTHNSDVEYLKFNGLWKLQPFELFLLQKLAKWRVEEAIKRNIAVNFIL
REELLFKIIKLESFSINQLKNVV
NT seq 792 nt   +upstreamnt  +downstreamnt
atgatttcatatactttaattgaaaatgaactagaacttgaaaagtcctgcttacttttg
agagatgcacctattttaatgattgatacggagttcgttaaaactagaactttttttgca
tccttgagtattttacagatttttgatggaaaaaatttatatatttttgatgctattaaa
attaaaaatttagatttactttggttaactttaagtaatcctgatatcaaaaaagtattt
cattcatcatcagaagatctggatattattgtgcatttatctccttatgacattactaat
atagttgatacacaaataatggcagtttttcttggtttaggtttatcagtaggtttttct
aaactgtgttcacagttattaaacattgatattgataaaagtgaaagtcgatcaaactgg
ttacatagaccattaagtgaaagtcagctaaggtatgctgcaagtgatgtttattattta
taccccatttatcagagattaaatcatttatcaattgaaagaaaattagacggtttaatt
ttgatagaatgcaataggcttcttgaagctaaaaaacaaactcataactctgatgttgaa
tatcttaaatttaatggcttatggaagcttcaaccctttgaattatttttattacaaaaa
ttagctaaatggagagttgaagaagcaataaaaagaaatattgcagtaaactttatctta
agagaagagttattatttaaaattattaaacttgaaagcttctctattaatcaattaaaa
aatgtggtttga

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