Paraphotobacterium marinum: CF386_05960
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Entry
CF386_05960 CDS
T05093
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CF386_05960
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmai01007
]
CF386_05960
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmai03016
]
CF386_05960
03029 Mitochondrial biogenesis [BR:
pmai03029
]
CF386_05960
Enzymes [BR:
pmai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CF386_05960
Amino acid related enzymes [BR:
pmai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CF386_05960
Transfer RNA biogenesis [BR:
pmai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CF386_05960
Prokaryotic type
Other AARSs
CF386_05960
Mitochondrial biogenesis [BR:
pmai03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CF386_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASK78582
UniProt:
A0A220VEJ0
LinkDB
All DBs
Position
large:1136804..1138555
Genome browser
AA seq
583 aa
AA seq
DB search
MYKQYCGRLDTSHKDQFITLNGWVQKRRDLGGLIFIDLRDREGIVQVVIDPEHIETNDDL
SKIRNEFCLEIKGHVRLRPQQQINHKITTGEIEINANTLKVISSADNLPLDFNQNNSEEQ
RLKYRYLDLRRTEMSQKLKARSRITSIIRNFLEEHDFLDIETPVLSKSTPEGARDYLVPS
RVHPGDFYALPQSPQIYKQLLMVAGFDKYYQIVKCFRDEDLRADRQPEFTQVDIETSFLT
SAEIRNIAESLVRRLWTQTLDIELPQFPVYTYDYVMETYGSDKPDLRNPLKIIDFKRSLS
SCSLGIIQESLSDENYVKGLCIPNGSKLSRKEIDNYIAYAKTFKSKGLIWIKLNNIKDGL
NGIQSSIKKFLTDEILNNIIKACDAEDGDILFISVDKKSNVLNILGELRNKIGNDLNLIR
LDEWQPLWVVDFPMFETSEDGNLQAMHHPFTSPKETSVDKILENPLELLSNSYDMVINGY
EVGGGSVRIHSQEIQAAIFKLLHLDEDEQQDKFGFLLEALSYGAPAHGGIAFGLDRLVML
LVGTNNIRDVIAFPKTTSASDLMMNAPSSVDINVLKDLSITVE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcaatactgtggtcgtcttgatacatctcataaagatcaatttattaccctt
aatggatgggtgcaaaaaagaagagatttgggaggcttgatttttattgacttgagagac
cgtgagggtattgttcaagttgtaattgatcctgaacatattgaaacaaatgatgattta
tctaagattagaaatgagttttgtttagagataaaagggcatgttcgtttaaggccacag
caacaaataaatcataaaatcacaactggtgaaattgagataaatgcaaatactttaaaa
gttatcagctctgctgataacttgccacttgattttaatcaaaataattctgaagagcag
cgtcttaagtatagatatttagatttgagaagaactgagatgtctcaaaaattaaaggca
cgttctcgaattacatctataattagaaattttctagaagagcatgactttttagatata
gaaaccccagtgttatcaaaatctacaccagaaggtgctagggattacttagttccaagt
agagtccacccaggggatttttatgctttacctcaatcaccacagatttataaacaactc
ttgatggttgctggatttgataaatattatcaaattgtaaaatgttttagagatgaagat
ctaagagctgataggcagcctgagtttactcaggtcgatattgaaacatccttcttaaca
tctgcagaaataagaaatattgcggagtcattagtaagaagattgtggactcaaacttta
gatattgaattacctcaatttccagtttatacatatgattatgttatggaaacatatggt
agcgataaacctgatttaaggaatccattgaaaattattgattttaaaagatcattatct
tcatgttcacttggtattattcaagaatctttgagtgatgaaaactatgttaaaggttta
tgtattcctaatggaagtaaactttcaagaaaagaaatagataattatattgcttacgca
aaaacattcaaatctaaaggattaatttggataaagttaaataacattaaagatggatta
aatggaatccaatcttccattaaaaagtttttaacagatgaaatacttaataatataata
aaagcttgtgatgctgaagatggcgatattttatttataagtgtagataaaaaatcaaat
gtattaaatattctaggcgaattacgaaataaaataggtaacgatttaaatttaatacgc
ttagatgagtggcaaccactttgggtagttgattttccaatgtttgaaacttctgaagat
gggaatcttcaagcaatgcatcatccctttacaagtccaaaagaaacaagtgtagataaa
atactagagaatcctctagaattactctcaaactcttatgacatggtaattaatggctat
gaagtgggtggtggatcagtaagaattcattcacaagagatacaagccgcaatttttaag
ttattacatttagatgaagatgaacaacaagataagtttgggtttttactcgaagcatta
tcgtacggagcaccagctcatggtggtatagcttttggtttagatagattggtgatgtta
ttagttggaactaataacattagagatgttatcgcatttccaaaaaccacttccgcatca
gatttaatgatgaatgctccatcttcagtagatataaatgtattaaaggatctttcgata
acagttgaataa
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