Paraphotobacterium marinum: CF386_06160
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Entry
CF386_06160 CDS
T05093
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmai03032
]
CF386_06160
03036 Chromosome and associated proteins [BR:
pmai03036
]
CF386_06160
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_06160
DNA replication proteins [BR:
pmai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CF386_06160
Chromosome and associated proteins [BR:
pmai03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CF386_06160
DNA repair and recombination proteins [BR:
pmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CF386_06160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ASK78615
UniProt:
A0A220VE20
LinkDB
All DBs
Position
large:1176757..1177035
Genome browser
AA seq
92 aa
AA seq
DB search
MTKSELIESLCSLKIHLSSKQLEDSINVIVESMSQTLESGDRIEVRGFGSFSLHFREARM
GRNPKTGEKVQLDGKYVPHFKPGKELRERVDY
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccgaacttattgaatctttatgttctttaaagattcacctgtcttctaag
caacttgaagattcaataaatgttattgttgagtctatgtctcaaactcttgaaagtgga
gatagaattgaggttaggggatttggtagtttttctcttcattttagggaagcaaggatg
ggtagaaatccaaaaactggcgaaaaagtccagttagatggcaaatatgtcccgcacttt
aaaccaggtaaagaactcagagaaagagttgattactag
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