Paraphotobacterium marinum: CF386_06300
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Entry
CF386_06300 CDS
T05093
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pmai
Paraphotobacterium marinum
Pathway
pmai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CF386_06300 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmai02000
]
CF386_06300 (msbA)
Enzymes [BR:
pmai01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CF386_06300 (msbA)
Transporters [BR:
pmai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CF386_06300 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
RsgA_GTPase
nSTAND3
AAA_22
AAA_30
DEAD
AAA_16
RecA_C
AAA_29
AAA_14
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ASK78640
UniProt:
A0A220VEB5
LinkDB
All DBs
Position
large:1205427..1207175
Genome browser
AA seq
582 aa
AA seq
DB search
MDSKNQKSFQIFKLLIPYFKPYKVIIIIAVIALIITQVTTLGATYLTKPIIDDGFNAQSQ
GNNFWVWLPLVLLGLVIIKGFTQFVYVYLIEYTTSKMVMSLRQQLFEHYLRLPVQFFDKR
NTGSLLSRITYDTEQVAQASGDALIRLITNTTLVIGYLALMIYQNWILSLSTLVLVPIMG
YCLKYIQNKMRTIAKRLQDTMGSVAAVSEEMLRGHREIRSYGGQKHEKKKFLETNNFYRR
QYMKMQTVTAIGDPVIVIISSFAGIILISLMNFEFIRDSLTPGSFVLIVSSAMMLPKPVK
TFSKTLSSFQKGMAACETLFQLFNFKPEKDDGNLEINKILGNIEFKNVSFEYENSDSKAL
KNCSFKLQKGKSLALVGRSGSGKTTITNLLNRFYTVTEGNIYIDGHDINQLKLNDLRKNI
SIVSQNIHLFNDSIYNNIAYPYNNVHEDEVIKAAKLANVSEFADKLEAGLNTVVGQNGVL
LSGGQKQRIAIARALLKSSPILILDEATSALDTESERLIQQAIENLEKDKTVIVIAHRLS
TIENCDTIAVMDRGEIVEMGTHSDLIKKQEAYYAFHNTQFEQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaaaaatcaaaaatcatttcaaatttttaagcttttaataccatattttaaa
ccttataaagttattattattatagctgtaattgctttaattatcactcaagtcactaca
cttggtgccacttatcttacaaaacctataattgatgatggttttaatgcacaaagtcaa
gggaataatttttgggtttggttgcccttagttttattaggattagtaatcattaaaggg
ttcacacaatttgtttatgtttatttaatcgaatataccacctctaaaatggttatgtca
ttgagacagcaattatttgaacattatttgagattgccagtacaattttttgacaaacga
aatacaggctctttgttatcaagaattacttatgatactgagcaagtagctcaggcttca
ggggatgccttaatacgtttgataacaaatacaacacttgttattggttatttagcgctt
atgatttatcaaaattggattttaagtttatctacattagttctcgttccaataatgggg
tattgtttaaaatatatacaaaacaaaatgagaacaatcgcaaaaagattacaagatact
atgggaagtgtcgctgctgtaagtgaagagatgttgagaggacacagagaaataagaagt
tatggcggacaaaaacatgaaaaaaagaaatttttagaaaccaataatttttaccgtaga
caatatatgaaaatgcagactgtaactgcaattggggatccagtcattgtcattatcagt
agttttgctggtatcatattaatttcattgatgaattttgaatttattagagactcattg
acaccgggctcttttgtgttgattgtttcttcagcaatgatgttgccaaaaccagttaaa
actttttccaaaacactttctagtttccaaaaggggatggctgcctgtgaaacgctattc
cagctttttaattttaaaccagaaaaagacgatggtaatcttgaaattaataaaatttta
ggaaatatagaatttaaaaacgtaagttttgagtatgaaaatagtgattcaaaagcttta
aaaaattgctcattcaaattacagaaaggtaaaagtttagctcttgttggacgttctggt
tctggtaaaacgaccattactaatttactcaatcgtttttacactgtcacagaaggtaat
atttatattgatggtcatgacattaatcaacttaaactgaatgatcttagaaaaaacatt
tcaatagtctctcaaaacattcatttatttaatgactccatttataataatattgcatac
ccatacaataatgttcatgaagatgaggtaataaaagcggctaaattagcaaatgtatct
gagtttgcagataagttagaagcgggtttaaataccgtagttggccagaatggtgtatta
ttgtctggaggacagaaacaacgtattgctattgcaagagcgttattaaagagttcacca
attttgattttagatgaggcaacatctgctttagatacagaatctgaaagattaatacag
caggcaatagaaaacttagaaaaagataagactgttattgttattgctcataggctttct
acaatcgaaaactgcgatactattgcagtcatggatcgaggtgaaattgtcgaaatgggt
actcacagtgacttaatcaaaaaacaggaagcatattatgcttttcacaatactcagttt
gaacagtaa
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