Paraphotobacterium marinum: CF386_08445
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Entry
CF386_08445 CDS
T05093
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_08445
Enzymes [BR:
pmai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CF386_08445
DNA repair and recombination proteins [BR:
pmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CF386_08445
Prokaryotic type
CF386_08445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASK79089
UniProt:
A0A220VFH0
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All DBs
Position
small:270104..271534
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AA seq
476 aa
AA seq
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MIKNDIAIHWFRNDLRIHNNNSLLNLSQKYKIFPIFIFDETQPKEDSANYWWLIHSLDKL
NQNLNGNLHVYHGKAADIIRKLIQKYNIKALGWNRCYDPSSIERDSFIKEEFKKFSLDYI
RSENSHLLWEPWKVKPTKNKLYTVFTPFYKKGCVSDPINKAKLNQPLQLVYSDIHESESL
FNISQFNLPIWTQKFKKYWKVGEESALSTFTDFVERKIDQYKDRRNDVDSEFISQLSPYI
HFGEISIHQMWDNLNKLPCNNGVNHFKSELGWREFSYYLLYNFPDLKEHNIRSEFNAYPW
KFNETFFDAWKWGQTGYPMVDAAMRSLYETGYLHNRCRMIVASFLTKNLNIHWKQGAEWF
DLTLMDADLASNYASWQWAAGSGTDTMQYSRIFHPVIQGKKFDVNGSYVRQYLPEISRLP
NEYIHCPWEAPQSILQNLGIQLGQDYPNPIVNFEQSTLEANKRFEIIQHLIKQNRS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaatgatattgcgattcattggtttagaaatgatttaagaatacataataat
aattcgttgttaaatttatctcaaaaatacaaaatttttcctatttttatttttgatgaa
actcaaccaaaggaagattccgcaaattattggtggttaattcattctttagataaattg
aatcaaaatttaaatggaaatttacatgtctatcatggtaaagctgcagatataataaga
aaattaattcaaaaatacaatattaaggcgttaggttggaatcgttgttatgatcccagt
tcaatcgaacgagatagttttattaaagaagaatttaaaaaattttcattagactatatt
agaagtgaaaacagtcatcttctttgggagccctggaaggtaaaaccgactaaaaacaaa
ctgtatactgtttttacacctttttataaaaaaggatgtgtaagtgatcctattaataaa
gctaaactgaatcagcctttacaactggtatactctgatattcatgaatcagaatcttta
tttaatattagccaatttaatcttccgatatggacacaaaaatttaagaaatattggaaa
gttggagaagagtctgcgcttagcactttcactgattttgttgaaagaaaaatcgaccaa
tacaaagatcgaaggaacgatgtggatagtgaatttatttctcaactttccccttacatc
cactttggtgaaatatctattcatcaaatgtgggataacttaaataagttaccctgtaat
aatggagtcaaccattttaaaagtgaattaggttggcgagaattttcttattatttactc
tataacttccctgatctgaaagaacataatattaggtctgaatttaatgcttatccatgg
aaatttaatgaaacattctttgacgcatggaagtggggtcagacaggatatccaatggtt
gatgctgcaatgagaagtttatatgaaacgggttatttgcataatagatgtaggatgatt
gtcgcatcatttttaactaaaaatttaaatattcattggaagcaaggcgctgaatggttt
gatctaacattgatggatgctgacttggcgagtaactatgcaagctggcaatgggccgct
ggctcaggtacagatacaatgcaatattcaagaatctttcatcctgttattcagggaaaa
aagtttgacgttaatggttcttatgttagacagtatttacctgagataagcaggttaccg
aatgaatatattcattgtccatgggaggcgcctcaatctattttacagaatcttggtatt
caacttgggcaagactatcctaatcctattgtaaattttgagcagtcaaccctagaagca
aacaaaagatttgaaattatccaacatcttataaagcaaaataggagttaa
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