Paraphotobacterium marinum: CF386_11015
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Entry
CF386_11015 CDS
T05093
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmai03400
]
CF386_11015
Enzymes [BR:
pmai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CF386_11015
DNA repair and recombination proteins [BR:
pmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CF386_11015
Prokaryotic type
CF386_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Terpene_syn_C_2
Motif
Other DBs
NCBI-ProteinID:
ASK79577
UniProt:
A0A220VGU1
LinkDB
All DBs
Position
small:complement(834725..836158)
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AA seq
477 aa
AA seq
DB search
MMSKNNRRLIWLRSDLRMMDNILFSRDYESSEETIVIYFHAIHEWKLHKKSNIQRALIFD
RLKYLYLLFKEKNIPFFIFEINSFSEIPDFLIQFMNQFSIQKLLSNYEYEYDESERDHAV
HFLLSRNNFEYIQMHNQTLLEPGTVLNGEKKMYKVFTPFKKKWIHQLDRSKFNIETNHYN
TLTDKIIFESAQNAYNNFFRDVEYENKYFYKEKEILEIFNSFVLNHLADYEFTRDIPAIN
GTSKMSPYLAVGIVSPQTLIKICIDSKIALDNSWVNEIIWREFYIHLLQAFPDLGQNKPF
LQYTKFIPWNESEDDFNKWKKGMTGFPIVDAGMRQLIEEGWMHNRVRMIVASFLTKNLLI
HWKKGQDWFMQHLVDGTFASNNGGWQWSASTGTDSQPYFRVFNPITQSKNFDPNGEYIKK
YVPELKNIPRKYIHEPWDYIQLNSENIYYEPMVSLSSSRKQAIETFKFAKEKYENGI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaaaaataatagaagattaatttggttaagaagtgatttaaggatgatggat
aatattttattttctagagactatgaatcatcggaagaaactattgttatctattttcat
gccattcatgaatggaaattacacaaaaagtcgaatattcaacgcgctctgatatttgat
agactcaaatatttatatcttttatttaaagaaaaaaatattccattttttatttttgaa
attaatagcttttccgaaatacctgactttctgattcagtttatgaatcaattttctatt
cagaaacttttgagcaactatgagtatgaatatgatgagtctgaaagagatcacgctgtt
cattttcttttatctcggaataattttgaatatatacaaatgcataatcaaactttatta
gagcctggaactgtattaaatggtgagaaaaaaatgtacaaggtttttactccatttaaa
aaaaaatggattcaccaactagatagaagtaaatttaatatagaaactaatcattataat
acccttaccgataaaattatttttgaaagcgcacagaatgcatataataatttctttaga
gatgttgaatatgaaaacaaatatttttataaagagaaagaaatcttagagatattcaat
tcttttgtccttaaccatttagccgactacgagtttacacgagatattccagctataaat
ggaacaagtaagatgtccccatatcttgccgtaggcattgtctctcctcagactttaata
aaaatctgcatagactcaaaaatagctctcgataatagttgggtaaatgaaattatctgg
agagaattttatatccatttactacaagcatttccagatttaggacaaaataaacccttt
cttcaatatactaaatttattccatggaatgaatctgaagatgattttaataaatggaaa
aaagggatgactggttttccaattgtagatgctggaatgagacaattaattgaagaaggt
tggatgcataatagagttagaatgattgttgcaagttttcttaccaaaaacttattaatt
cattggaaaaaaggacaagattggttcatgcagcatttagtggatggaacatttgcttca
aataatggtggatggcaatggtcagcttctacaggaacggattcgcagccttactttaga
gtgtttaatcctattactcaaagtaagaactttgatcctaatggagaatacatcaaaaaa
tatgttcctgaactaaaaaatattcctagaaaatatattcatgaaccatgggattatatc
caactaaactctgaaaatatttactatgaacccatggtaagcttgtcatcttctcgaaaa
caagctatcgagacttttaagtttgcaaaagaaaaatatgaaaatggaatttaa
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