Paraphotobacterium marinum: CF386_12115
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Entry
CF386_12115 CDS
T05093
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmai
Paraphotobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmai03016
]
CF386_12115
Enzymes [BR:
pmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CF386_12115
Transfer RNA biogenesis [BR:
pmai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CF386_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
S1
OB_RNB
CSD2
Motif
Other DBs
NCBI-ProteinID:
ASK79780
UniProt:
A0A220VHQ3
LinkDB
All DBs
Position
small:complement(1061267..1063093)
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AA seq
608 aa
AA seq
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MWFLETEKKEKIFLSQKFMKQLINGDKIEAIIREQDKKKYAEPIKLISSELESFTGTAIK
KNNKFFIVPDNALINHHFKIEESNIIDMKENETFLCNFSQHKMNNKTSFNCKVQFKVAES
DDIFKKWKSALANLNLPFHGPNEQEVSFALNDEKLIDLTEKPFVTIDGPDTKDIDDALYI
EKASNNSYKLTIAIADPTSYFEHESTLDEEARVRISTIYLPGMNVPMLPKKLSEEICSLR
PHQKKSTLCCEVIIDENGQINKDVHFFMAWIKSQGQLSYEQVFEFLQNKTNLPTSNPLVE
QQLQLLELFCQKRLSYRHKNEILFKDQNEYKFELNEDNSVKNIKTESKNIAHKIVEEAMI
VANQVAGHFLATKLNKGIFNTNSGLDMAKRTEIESLFKKLNINFFDNNNENLTIENYKNY
REWLDEQPGYIKKRLRKFNAHTSLSTDPGSHYGMGIQNYATWTSPIRKYSDLLNHRLIKS
IISVDKPIEELNSDFLDASILKRKLHRFAEREINNFLYANFLKNHKLNNTIFKAEVFDVT
KAGLRLKLIENGASVFLPANSIDNKIKFNNELFQLKSNECTFDIGQVLKVSILDINDENY
NITVKLIK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atttggtttttagaaacagaaaaaaaagaaaaaatctttttatctcagaaatttatgaaa
caattaataaatggtgacaaaattgaagcaattatccgagaacaagataaaaaaaaatat
gcagagcctatcaagctaatatcttctgaattagaaagctttacaggcaccgcaatcaaa
aaaaataacaagtttttcattgtacctgataatgctttgataaatcatcattttaaaata
gaagaatctaatattattgacatgaaagagaatgagacgtttttatgtaatttttcacaa
cataaaatgaataataaaacctcatttaactgtaaagtgcaatttaaagtagctgaatct
gatgatatttttaagaaatggaaaagtgcattagctaacttaaatcttccttttcatggg
cctaatgaacaagaggtatcattcgctcttaatgacgaaaaacttatcgacttaaccgaa
aagccgtttgtaactatcgatggtcctgatacaaaggatattgatgatgccctttatata
gaaaaagctagtaataactcttataaattaaccatagccatagcagatccaacctcatat
tttgaacatgaaagtacattagatgaagaagcacgtgttcgaatctctactatttatctt
ccaggaatgaatgttccaatgttaccaaaaaaattaagtgaagaaatatgctctcttcga
ccacatcaaaaaaaatcaactctttgttgtgaagttataattgatgaaaatgggcaaatc
aataaagatgttcacttttttatggcttggattaaatctcaggggcagttaagctatgaa
caagtatttgagtttttacaaaacaaaacaaatcttccaacttctaatcctttagttgaa
caacaacttcaacttttagagttattttgtcaaaaacgattatcgtatagacataaaaat
gaaatactttttaaagatcaaaatgaatataaatttgagttaaatgaagataacagcgta
aaaaatatcaaaacagaatcaaaaaatatagcccacaaaattgttgaagaagcaatgatt
gtagcaaatcaagttgcaggacattttttagcaacaaagttaaacaagggtatttttaat
actaactctggcttagatatggctaaacgaacggagatagagtctctatttaaaaaactc
aatatcaatttcttcgataacaataatgaaaatttaacgattgaaaattataagaattat
agagaatggttagatgaacagcctggttatataaaaaaaagattaagaaaatttaatgct
catacaagtctatcaaccgatcctggctcacattatgggatgggcattcaaaattacgca
acttggacctctcctataagaaagtacagtgacttacttaatcatagattaattaaatcc
attatttcagttgacaagcctattgaggaattaaatagtgactttctagatgcttctatt
ttaaaaagaaaattacatcgttttgcagagcgcgaaataaataactttttatacgcaaac
ttcctgaaaaaccataaattaaataatacaatctttaaagctgaagtttttgatgtcacc
aaagcaggtttacgattaaagttaattgagaatggagcatctgttttcttaccagccaat
tcaatcgataacaaaattaaatttaataacgaattatttcaattgaaatctaatgaatgt
acttttgatatagggcaagttttgaaggtgtccattttagatataaatgatgaaaactat
aatatcactgttaaattgattaaataa
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