Paramixta manurensis: PMPD1_0408
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Entry
PMPD1_0408 CDS
T10259
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmak Paramixta manurensis
Pathway
pmak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMPD1_0408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmak03021
]
PMPD1_0408
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_0408
Enzymes [BR:
pmak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMPD1_0408
Transcription machinery [BR:
pmak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PMPD1_0408
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PMPD1_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QKJ85388
UniProt:
A0A6M8U3T9
LinkDB
All DBs
Position
422414..423403
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgaaccattagagcgtggctttggtcacactcttggt
aacgcactgcgccgtattctgctttcatcaatgccgggttgcgcggtgaccgaggttgaa
attgatggtgtactgcatgagtacagcaccaaagaaggcgttcaggaagatatccttgag
atccttctcaacctgaaagggctggcggtaagagttcagggtaaagatgaagttatcctg
accttgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccatctgaccgatgaaaacgcatcaatt
agcatgcgcatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggacgtctgttggttgacgcctgctacagccctgta
gaccgtatcgcctacaatgttgaagctgcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcactatcgatcctgaagaggcgattcgtcgtgcg
gcaaccatcctggcagaacaactggaagctttcgttgatttacgtgatgtacgtcaaccg
gaagtgaaagaagagaaaccagagttcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgttgaaaacgcctaaccttggtaaaaaatctctt
actgagattaaagacgtgctggcctcacgtggtctgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgatgaataa
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