Paramixta manurensis: PMPD1_0519
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Entry
PMPD1_0519 CDS
T10259
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmak Paramixta manurensis
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmak03016
]
PMPD1_0519
Enzymes [BR:
pmak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PMPD1_0519
Transfer RNA biogenesis [BR:
pmak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PMPD1_0519
Prokaryotic type
PMPD1_0519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QKJ85495
UniProt:
A0A6M8U4C3
LinkDB
All DBs
Position
532047..532991
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLFNANRAGHTGALDPLATGMLPICLG
EATKFSRYLLDSDKRYRVIARLGQRTDTSDADGAVIQTRPLQFTSQQLEQALESFRGETL
QVPSMYSALKHQGRPLYEYARQGIEVPREARSIVVYELQFIRQQQDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRLQVATYPLERMITLEALNALAAEASEQGLAPGEKLDAL
LMPMDSPAAAFPETNLSGVVAAYFRQGQPVQAAGLPLTGLVRVTEGDERKFIGMAEIDDA
GRLAPRRLVVEYSD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgtcgtggacgtgatattcatggcgtgttgttattggataaacct
cagggcctgtccagtaatgacgcgttgcagaaagtgaaacgtctgtttaacgccaataga
gccgggcataccggcgcgcttgatccactggcgaccggtatgttgccgatttgccttggc
gaagccactaagttttcccgttacttgcttgactcagataaacgttatcgcgtaattgcg
cgccttgggcagcgtaccgatacctctgatgctgacggtgcggtgattcagacgcgtcct
ttgcagtttaccagccagcagttggagcaggcgctggagagtttccggggcgaaactctg
caggttccctcgatgtattcagcgctgaaacaccaggggcgcccgctgtatgaatatgcg
cgtcagggcattgaagtaccgcgcgaggcgcgcagcatcgtggtgtatgagttgcaattt
attcgccagcaacaggatgagctggagctggaaatccactgttcgaagggaacctatatc
cgcaccatcattgatgatctcggcgaaaagttaggctgcggcgcgcatgtaattatgtta
cgtcgtctgcaagtggctacctatccgctagaacgcatgatcacgctggaggcgttaaat
gcgttggcggcggaggccagcgagcaggggctcgcgccgggtgagaagttggacgcattg
ctaatgccgatggatagtccggccgctgcttttcctgaaacgaatctatctggcgtggtc
gccgcctatttcaggcaaggccagccggtacaggccgccgggttaccgttaacaggtttg
gtgcgagtaaccgaaggcgatgaacgcaagtttatcggtatggcggagattgatgatgcc
gggcgtctggcgccgcgtcgcctggtggttgaatattctgattga
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