| Entry |
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| Name |
(GenBank) ATP-dependent RNA helicase DeaD
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| KO |
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| Organism |
pmak Paramixta manurensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pmak00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMPD1_0523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pmak03019]
PMPD1_0523
03009 Ribosome biogenesis [BR:pmak03009]
PMPD1_0523
Enzymes [BR:pmak01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PMPD1_0523
Messenger RNA biogenesis [BR:pmak03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMPD1_0523
Ribosome biogenesis [BR:pmak03009]
Prokaryotic type
rRNA helicases
PMPD1_0523
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
537002..538882
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| AA seq |
626 aa
MTDIQTTFADLGLNADILESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLNNIDPAVKAPQILVLAPTRELAVQVAEAVTEFSKHMRGLNVVALYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLDLSSLRGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSLTTRPDISQSYWTAYGRKTDALTRFLE
AEDFDAAIIFVRTKNATMEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLSQRRLAKFAGKVQQQLESSDLDQYRALLAKLQPEDELDMETL
AAALLKMAQGERPLILPPDPAPRPRREFRERDDRRGDRPERGARDGDRPRRERREVGDME
LYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGDILQHFTR
TRILNKPMNMQLLGDAQPRERGAERRPAAGGRGGFSGERREGGRRFSNDRNDRGGERRGG
GFNRDGGNRGPRRDEGGNAPTRRRDA |
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| NT seq |
1881 nt +upstreamnt +downstreamnt
atgactgatatccaaaccacttttgctgaccttggcctgaacgccgacatcctcgaatca
ctgaacggtatgggctacgttaagccatccccaatccaggctgagtgtattcctcacctg
ctggcgggccgtgatgtgttaggtatggcgcagaccgggagtggtaaaaccgcagctttc
tcgctgccgctgttaaacaacattgaccctgcggtcaaggcaccgcaaattctggtgctg
gccccaactcgcgaactcgcggttcaggtagctgaagccgtgaccgaattctctaaacat
atgcgcggcctgaacgtcgtggccctgtatggcggccaacgttatgacgtgcaactacgc
gctctgcgccaaggcccacaggttgtggttggtacgcctggccgcttgctggaccatttg
aaacgcggcacgctggatctctctagcctgcgcggtttagtgctggatgaagcagacgaa
atgttacgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
catcagaccgcgctgttttcagcgaccatgccggaagctattcgtcgtattaccaaacgc
tttatgaaagatccgcaggaagtgcggatccaatcgagcctgaccacgcgtccggacatt
agccagagctactggaccgcttacggtcgtaaaacagatgcgctgactcgtttcctcgaa
gcggaagattttgatgcggcgattattttcgtgcgtaccaaaaacgcaaccatggaagtg
gcggaagcattggagcgtagcggttataacagcgccgcgctgaatggtgacatgaaccag
gcgctgcgtgagcagaccctggagcgcttgaaagatggtcgtctggatattctgatcgcg
acagacgtggcggctcgtggtcttgacgttgagcgtattagcttggttgttaactacgat
atcccgatggatgcggaatcatatgttcaccgtattggccgtaccggtcgtgcggggcgc
gcaggccgtgcgttgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacattgaa
cgcaccatgaagctgacgattcctgaagtggaattgcccaatgcagaactactgagtcag
cgtcgcttggctaagtttgctggtaaagttcagcaacaactggaaagcagcgatcttgat
cagtaccgcgcgctgttagctaagctgcaaccggaagatgaactggatatggaaacgctg
gctgccgcattgctgaaaatggcgcaaggcgaacgtccgctgatcctgccgccggatccg
gctccgcgtccgcgtcgtgaattccgcgagcgtgatgatcgtcgtggcgatcgtccggag
cgtggcgcacgtgatggcgaccgtccacgtcgtgagcgccgtgaagttggcgatatggaa
ctgtatcgtatcgaagtgggccgtgatgacggtgttgaagttcgtcacatcgtcggcgcg
attgccaacgaaggcgacatcagcagccgctacatcggtaacattaagctgtttgcatcg
cattcgaccattgagctgccgaaaggcatgccgggcgatatcctgcaacactttacccgc
acgcgtattctcaacaagccgatgaatatgcaactgttgggtgacgcgcagccgcgtgaa
cgcggagcagagcgtcgtccggctgcgggcggacgcggcggtttctccggcgagcgtcgt
gaaggtggccgtcgttttagcaacgatcgtaacgatcgcggcggcgaacgtcgtggcggt
ggtttcaaccgtgatggcggtaaccgtggcccgcgtcgtgatgaaggcggcaacgcgccg
acccgtcgtcgtgatgcgtaa |
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