Paramixta manurensis: PMPD1_0740
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Entry
PMPD1_0740 CDS
T10259
Name
(GenBank) Type IV secretion protein Rhs
Organism
pmak Paramixta manurensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Tox-SHH
DUF6531
PAAR_motif
RHS
TEN_YD-shell
DUF7099
Motif
Other DBs
NCBI-ProteinID:
QKJ85712
UniProt:
A0A6M8UFZ4
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All DBs
Position
760161..764573
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AA seq
1470 aa
AA seq
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MDNHAARKDDDLIHSSIFADITSIVAEGAAYAVIGAAVGAAAAAAAPLAGAGAVAAGLAA
VGSSCLLSGIIGGVLANLTGVADDISAAASGLGNFLFPPSVSGKITSGAVNVLTNGKQAA
RAAGKAPDARTPPPEPQSPLSFLDYGRELLGAAGQIASSFWQPVVAGPAAGASPLQQDTI
SCEKHSGPQYLAEGSSTVLINGQPAVRARDRSTCEATVSDEVSPDVVIGGNAVVVREIKS
GKTPGLALAMMILPLLRGRPGQVLKNMPCALAGAIGGMAADMAVNAAFSSFYPVHAATGV
KVLNDDNDLDFSLPGRFPLRWQRNYNSLTTREGLFGRGWATLFDTYLELNGDEATLYDET
GRELRFQLPEVREPLYSLSEGLIIRRGPDGALVIADDDGSRWCLYRPTRHNPAVLRLASV
SDEYANGLELSYDEAGRLVRLHDAPCAIDVTLHYEDTRHPRCVTALSHFDGERHWPLMRY
GYDGHGQLATVTDAAEVTTRAFRYNDQQLMVWHRLPGGLESEYRWAHFDHWRVIENRTST
GDGCRMDYDLDAGLTTVTTYDGETRQHYQNAQALVTRFVDERGASWLFDWDENEQLIATT
DPLGNTVRYRYDDAGNRVEEIDADHNTRATQWLAHRALPTAVTEADGATTRFYYDERHAL
SQVVLPGGGSERFERDEYGQVTAQTDAAGGVRRLEYNEAGQVIRATDCSGYTTRYRYHPL
GWLLAEITANGEETRYEYDAAGRPVALYRPENWQETLEWSPQGLPLAHHAADGRRSEFRY
DAAGRLTATRNPQGHEVQREYDNRGRMTALVNENGERYGFNWGKGSLLEVETGLDGTVTH
YGYDACGRTVSRTFAYGTPDAFSHHFRYDPRGILIARATPEAETRWQVSATGQLLQASVH
PALGDGVYTRAADQTVRFEYDPSGALIAEEGENGRVGYQYDALGNRTAVTLPDGRQLKQL
YYGSGHLLSIALDGLPVSDFTRDTLHRELSRSQGTLTSRSGYDRLGRLQQRDVFAGQAQR
PAPRHWSRHWDYDYRNNLIREEQDDNPFSWRRWQYDSAGRLLKQDGAQPDHEQWSWDAAS
NPQDGGVAPVRHNRVTRLNGIHWRYDAFGRVAEKDNGRETWHYRYDSEHRLSEVVHRTRG
RDRPETHVSFRYDPLGRRISKSRWQAQHGQRQGRVRTTRFVWEGMRLLQEIHDEVPLTYV
YADQGSYEPLARIDGVSQPEIYWFHCAPNGMPERLTDTEGEVRWHGHNSAWGKLLREERL
NGPGYAQNLRMQGQYLDRETGLHYNLFRYYDPDCGRFTQPDPIGLAGGINLYQYAPNALG
WVDPWGLMKCSAPNGYKSGDVDPHGKLSPGVNRAVGHKNSKADGFVQSHHPIQDAWAKKR
INDYQRNSAPATLLKSSSGSPHAAISTAQRARRAATGGWDTTLKQEFNISYKEMLDAGVP
TNQARKSLGDAFKYFDRLRESNMGNPFFDI
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggataatcacgcggcgcgtaaggatgacgacctcatccattccagtattttcgcggac
atcaccagcattgtagcggaaggtgcggcctatgcggttatcggcgctgccgtgggcgca
gcggcggcggctgccgcaccgttagccggtgccggtgccgtggctgccggtctggccgcc
gtgggctccagttgcttactcagcggcattatcggcggcgtgctggcgaacctgaccggc
gtggcggatgacatttccgctgctgcttccgggcttggcaacttcctcttcccaccgtcg
gtcagcggcaagataaccagcggagcggttaatgtattaaccaacggtaaacaggctgcg
cgggcggcgggtaaagcgccggatgccagaacgccgccgccggaaccacaatccccgctc
agttttctcgactacggacgtgaactgttgggcgccgccgggcagatagccagttccttc
tggcaaccggtggtcgccggtccggcggcgggcgcctcgccactgcagcaggacaccatt
tcctgtgaaaaacactctggcccgcagtatctggcggaaggttcgtcaacggtgttgatt
aacggacagccagcggtgcgcgccagggatcgctctacctgtgaagcgacggtatcagac
gaggtttcgccggacgtggttattggcggcaatgcggtggtggtgcgtgagataaaaagc
ggcaaaacgccggggctggcactggcgatgatgatattgccgctgctgcgtggtcgaccg
gggcaggtgctgaaaaatatgccctgcgcgctggcaggcgccatcggcggtatggcggcg
gacatggccgtcaacgcggcattttcctcgttctacccggttcatgccgccaccggcgtt
aaggtgctgaatgatgataacgatctcgacttcagcctgccggggcgttttccgctgcgc
tggcagcgcaactacaacagcctgacgacgcgcgaagggttgtttggtcgcggctgggcg
acgctgttcgatacttacctggaactgaatggcgacgaagccacgctgtacgacgagacc
gggcgcgaactgcgttttcagctcccggaggtacgcgagccgctatacagcctgagtgaa
gggctgattatccggcgcgggccggacggcgcgctggtgattgccgacgatgatggcagc
cgctggtgcctctatcgcccaacgcgacataacccagcggtgctgcgactggcttcggtc
agcgatgagtatgccaacgggctggaactgtcgtatgacgaagcggggcgtctggtacgt
ctccatgatgcgccctgcgccattgacgtcacgctgcactacgaagacacccgccatccg
cgctgcgtgaccgcgctgtcgcactttgacggtgagcggcactggccgctaatgcgttac
ggctatgacggacacggccaactggcgacggtcaccgatgcggcggaggtgaccacccgc
gcgtttcgttacaacgatcagcaactgatggtctggcaccgactaccgggcgggctggag
agcgagtaccgctgggcgcatttcgaccactggcgggtaatcgaaaaccgcaccagtacc
ggtgacggctgccgcatggattatgaccttgatgccgggctaaccactgtcaccacttat
gatggtgaaacccgccagcattatcagaacgcgcaggcactggttacgcgcttcgttgac
gagcgcggtgcaagctggctgtttgactgggatgagaacgaacagcttatcgccaccacc
gacccactcggtaataccgtacgctaccgctacgatgacgccggaaatcgcgttgaggaa
atcgacgcagaccataacacccgcgccacgcaatggctggcgcaccgtgcgttacccacg
gccgtaacggaggccgatggggccaccacacgtttttattacgacgagcgccatgcgctt
tcacaggtggtactgccgggtggcggcagcgaacgctttgagcgtgatgaatatggtcag
gtcacggcgcagaccgatgcggcgggcggcgttcgccgcctggagtacaacgaggcgggg
caggtgatccgcgccacagattgttccggttataccacgcgctaccgctatcatccgctg
ggctggctgctggcagaaattaccgccaacggcgaggaaacgcgctatgagtatgacgcc
gccggtcgtccggtcgcgttgtaccggcccgagaactggcaggagacgctggagtggagc
ccacagggattgccgctggcgcaccatgcggcggacggcaggcgcagcgagttccgctat
gatgccgccggtcgcctgaccgccacccgcaatccgcaggggcatgaggtgcagcgcgag
tacgacaatcgtggacgcatgacggcgctggtcaatgaaaacggcgagcgctacggtttt
aactggggtaaggggtcgttgctggaagtggagaccgggctggatggtacggtgacccac
tacggatatgatgcctgtgggcgcaccgtcagccgtacctttgcttacggcacgccggac
gctttcagtcatcattttcgctacgatccacgcggtattttgatcgcccgcgccacgccg
gaggcggagacacgctggcaggtttcggcaaccgggcaactgctgcaggcctcggtgcat
ccggcactgggcgacggcgtctacacccgtgcggcagatcagacggttcggtttgagtat
gatccttccggcgcgcttattgccgaagaaggggagaacgggcgcgtcgggtatcagtat
gatgcgctgggcaaccgcaccgccgtcacactgccagacggccgacagttaaagcagctt
tactatggcagcgggcatctgctgagcattgcgctggacggcctgccggtcagcgacttt
acccgggataccctgcaccgcgagctgagccgcagccagggtacgttaaccagccgcagc
ggctatgaccggctggggcgtttacagcagcgcgatgtgttcgccggacaggcgcagcgt
ccggcgccgcgtcactggtcacggcactgggactacgactatcgcaataacctgatacgg
gaagagcaggacgataacccgtttagctggcggcgctggcagtacgacagcgccgggcgg
ctgctgaagcaggacggggcgcaaccggaccatgaacagtggtcgtgggacgcggcttcc
aatccgcaggatggaggcgtggcgccggtacggcacaaccgggtgacgcggctgaacggc
attcactggcgttatgacgccttcggacgcgttgcggagaaggataacgggcgggagacg
tggcattaccgctatgacagcgagcaccggctgagcgaggtggtgcaccgcacgcgtgga
cgcgaccggccagagacccacgtcagcttccgctacgacccgctgggacggcgcatcagt
aaaagtcgctggcaggcgcagcacggtcagcgtcagggacgggtacgcaccacgcggttc
gtgtgggaagggatgcggctgctgcaggagattcatgatgaggtgccgctgacctacgtg
tatgcggaccagggcagctatgagccgctggcgcggattgacggcgtgagccagccggag
atttactggttccactgtgcgccgaacggcatgccggagcggctgacggacacagaggga
gaggttcggtggcacggccacaacagcgcgtggggcaaactgctgcgcgaggagcggctg
aatggccccggttacgcacagaacctgcgcatgcagggacagtacctggaccgtgagacc
gggttacattacaatttattccgttattacgacccggactgtgggcgcttcacgcagccg
gacccgatagggctggcgggcgggataaatctgtaccagtatgcgccgaatgcgctgggc
tgggtggacccgtgggggttgatgaaatgtagtgctccaaatggttacaaaagtggagat
gtcgatcctcacggaaaactatctccgggagttaatcgtgcagtagggcataaaaacagt
aaagctgatggttttgttcaaagtcaccaccctattcaggacgcatgggccaagaaaaga
attaatgattatcaaagaaattctgctcctgcaacgctactaaaatcgtcatctggtagc
ccgcatgcagctatcagtactgcacagcgtgcccgaagagctgcaactggtggctgggat
acaaccctgaagcaagaatttaatattagctataaagaaatgttagacgctggcgtgcct
actaatcaggcccgtaaatctctcggtgatgcatttaaatattttgatagactcagagaa
agcaacatgggcaatccgttctttgacatttga
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