Paramixta manurensis: PMPD1_0929
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Entry
PMPD1_0929 CDS
T10259
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pmak Paramixta manurensis
Pathway
pmak00550
Peptidoglycan biosynthesis
pmak01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PMPD1_0929
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmak01003
]
PMPD1_0929
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmak01011
]
PMPD1_0929
Enzymes [BR:
pmak01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PMPD1_0929
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PMPD1_0929
Glycosyltransferases [BR:
pmak01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PMPD1_0929
Peptidoglycan biosynthesis and degradation proteins [BR:
pmak01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PMPD1_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
FtsA_C
Motif
Other DBs
NCBI-ProteinID:
QKJ85898
UniProt:
A0A6M8U5G6
LinkDB
All DBs
Position
977275..979782
Genome browser
AA seq
835 aa
AA seq
DB search
MSGNDREPIGRKGKQPKPPRKTAGRGRRRDDYDNYDDDQDDFDDEYEEVEPVPRKGKRRP
PSKKRGWLGLFIKLFLIFVVLMAAYGVYLDSEIRSRIDGKVWQLPAAVYGRMVSLEPGMS
YNKKEMIALLEGTQYREVTRMTRPGEFTVQANSIEMIRRPFDFPDSKEGQIRARLSFSGG
TLSEIKNLDSNRDFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLVATEDRHFY
QHDGISFYSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMD
ARYSKDRILELYLNEVYLGQAGNDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKGAS
LYNPWRNPKLALERRNLVLRLLQQQKVIDQELYDMLSARPLGVQPKGGVITPQPAFMQMV
RNELQAKLGDKVKDLSGVKIFTTLDPVSQDAAEKAVEEGVPALKKQRGLKDLQTAMVIVD
RFSGEVRAMVGDANPQFAGYNRALQARRSIGSLAKPATYLTALAQPDKYRLNTWLGDEPI
ALKLPNGQVWKPQNDDHRFSGKVMLVDALTNSMNVPTVNLGMSLGLDQVVDTWTKLGLPK
DQLHPVPAMLLGALNLTPIEVAQAFQSIASGGNRAPVSALRSVIAEDGTVMYQSFPQAER
VEPAQAAYLTLYGMQQVAARGTAHALGARFPNANLAGKTGTTNNLVDSWFAGVDGKEVAI
TWVGRDNNQPSKLYGASGAMQLYRRYLDNQAPMPLVLTPPEDTAQMNVDSAGNFVCGTGS
STWRTLPVWTTDANALCQQQQQQVQQQQQLEQQQQDEQKGSDGVAGWIKDMFGSK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaacgatcgcgaacctattgggcgtaagggaaaacagcccaaaccgccgcgt
aagacggcaggaagaggtcgccgcagggatgattacgataattacgatgacgatcaggat
gattttgatgatgagtacgaggaggtagaaccggtgccacgtaaaggaaaaaggcgtccg
ccgagcaagaaaagaggctggctggggttatttatcaagctgtttctgatcttcgtggtg
ctgatggcggcctacggtgtttacctggattccgaaatccgcagccgtattgatggcaaa
gtgtggcagcttcctgcggcagtttatggccgtatggttagccttgagccaggcatgtcc
tataacaaaaaggagatgatcgcgctgctggaggggacgcagtaccgtgaggtaacgcgg
atgacgcggccgggcgagtttacggtgcaggcgaatagcatcgaaatgatccgccgcccg
tttgattttccggatagcaaagaggggcagatccgcgcgcggctctcgtttagcggcgga
acgttgagcgaaattaaaaacctcgacagtaatcgcgattttggtttcttccgtctcgat
ccccggttgatcaccatgctgcaatcaccaaatggcgagcagcgtctgtttgtaccacgc
gccggtttcccggacctgttggtggatacattggtggcaaccgaagaccgccacttctat
caacatgatggcatcagtttctactccattggtcgcgctttcctggcgaatattaccgcc
ggacgagcggtgcagggcggcagtacgctgacgcaacaactggtcaaaaacctgttcctc
accaatgagcgttcgctatggcgtaaagccaatgaagcctatatggcgctgattatggat
gcgcgttacagcaaagaccgcattctggaactctacctgaacgaagtttatcttggtcag
gcggggaacgatcagatccgtggtttcccattggccagtctgtattactttgggcgtccg
gtcgatgagttgagccttgatcagcaggcgttgctggttggcatggtgaaaggcgcgtcg
ttgtataacccgtggcgcaatccgaagctggcgctggaacgtcgtaatctggtgttgcgt
ctgcttcagcagcaaaaagttatcgaccaggagctgtacgatatgctcagcgcccggccg
ctgggagtgcaaccgaaaggcggcgtgatcacgccacagcccgcgtttatgcagatggtg
cgtaatgagttacaggcgaaactgggcgataaggtaaaagatctctccggggtgaaaatt
ttcaccacccttgatcccgtctcacaagatgcggcggaaaaagcggtagaagagggggtt
ccggcgctgaaaaaacagcgtggcctgaaagatctgcaaaccgcgatggtgatcgttgac
cggtttagcggcgaggttcgggcaatggtgggtgacgcgaatccgcaatttgccggttat
aaccgcgcattgcaggcacgtcgctctatcggctcgctggcgaaaccggcgacgtatttg
accgcgctcgcgcagccggataaatatcgtctgaatacctggctcggcgatgagccgatt
gcgctgaaattaccgaacgggcaagtttggaaaccgcagaacgatgatcatcgctttagc
ggtaaggtgatgttggtggatgcgcttactaactcgatgaacgtgccgacggttaatctt
ggaatgtcgctcggtctggatcaggtagtggatacctggacgaaactggggctgccgaaa
gatcagcttcatccggttccggcgatgctgttgggggcgctgaacctcacgccgatcgaa
gtggcgcaagccttccagtcgatcgccagcggtggtaatcgcgcgccggtttccgcctta
cgttcagtgattgcggaagatggtacggttatgtatcagagcttcccacaggctgagcgc
gttgaaccggcacaggcggcttatttgacgttgtacggtatgcagcaagttgcggcccgg
ggtactgcgcacgctttaggcgcacgtttcccgaatgcgaacttggcgggtaaaaccggt
accactaacaatctggtcgacagttggtttgccggcgttgatgggaaagaggtcgcgata
acgtgggtcggacgtgataataatcagccgtccaaattgtatggcgcttccggtgcgatg
cagctttatcgccgttatctggataatcaggcaccgatgccgctggtattgacgccgccg
gaagacaccgcgcagatgaatgtggattccgccggtaatttcgtgtgcggtaccggcagc
agtacctggcgtactcttccggtgtggaccaccgatgcgaacgcgctatgtcagcagcaa
cagcagcaagtccaacagcagcagcagttggaacaacagcaacaggatgagcagaaaggg
agcgatggcgttgctggctggataaaagatatgtttggcagtaagtaa
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