Paramixta manurensis: PMPD1_1250
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Entry
PMPD1_1250 CDS
T10259
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmak Paramixta manurensis
Pathway
pmak03030
DNA replication
pmak03430
Mismatch repair
pmak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMPD1_1250
03430 Mismatch repair
PMPD1_1250
03440 Homologous recombination
PMPD1_1250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmak03032
]
PMPD1_1250
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_1250
Enzymes [BR:
pmak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMPD1_1250
DNA replication proteins [BR:
pmak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PMPD1_1250
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PMPD1_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
AAA_16
ResIII
AAA_assoc_2
AAA_2
TsaE
nSTAND3
AAA_7
DUF3019
AAA_24
Mg_chelatase
PIF1
SKI
DUF7180
Motif
Other DBs
NCBI-ProteinID:
QKJ86215
UniProt:
A0A6M8U6H7
LinkDB
All DBs
Position
1300572..1302545
Genome browser
AA seq
657 aa
AA seq
DB search
MTHWFINASHKQMSYQVLARKWRPQAFSDVVGQEHVLTALANGLSLGRIHHAYLFSGTRG
VGKTTIARLLAKGLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLL
DNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILS
RCLQFHLKALDVEQIRAQLARVLDAEQIAAEPRALQLLARAADGSMRDALSLTDQAIAMG
QGQITTETVSAMLGTLDDDQPLALIEALVEADGQQVMALLNQAASRGVEWEALLVEMLRL
LHRIAMVQLQPSALGDEFAMIEQRLRELARVLPPADVQLYYQTLLVGRKELPLAPDRRMG
VEMTLLRALAFHPDAVIAEPVARPSMIPQTSPSATSAEAPRPAPVPSGSPPPAEAPTAHL
PDTTHQLLQARTQLMRQQGVNKPKKSEPAAQNARPASSALERLASVTERGQQQRQSAQAS
AAVAVKKEAYRWKAQTVPVEAPAPVATPKALRSALEHEKTPELAARLQEEAQQRDSWAAE
VASLTLPKLVQQLALNAWKEQTEQGVCLHLRSTQRHLNSASAQQVLAEALSAAAAQKVEL
TIIEDDNPAVLTPLEWRQKIYEEKLAQARQSIIADTHIQTLRRFFDADVDEESIRPV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgactcattggtttatcaacgcatcccacaaacaaatgagctatcaggtacttgcccgc
aagtggcgcccacaagcgttttctgatgttgtcggtcaggagcatgtcctgacagcgctg
gcaaatggcctgtcgcttggccgcatccatcacgcctaccttttttccggcacccgcggc
gtcggtaagaccactatcgcgcgtttattggcgaaagggctgaattgcgaaaccggtatt
accgcaacgccatgcgggcagtgcgataactgtcgtgaaattgagcaggggcgttttgtt
gacctgatcgagatcgatgccgcctcgcgcaccaaagtggaagacacgcgcgacctgctg
gataacgtacaatatgctccggcgcgcgggcgcttcaaagtttacctgatcgatgaagtg
catatgttatcgcgccacagcttcaacgctctgttaaaaacgctggaagagccgcctgag
cacgtgaaatttttgctggcgacgaccgacccgcaaaaattgccggtcaccatcctttca
cgctgcctgcaatttcatcttaaagcactggatgttgagcaaatccgcgcgcagttggcg
cgggttcttgacgcagaacagatcgccgccgagccacgcgcgctgcaactgttggcgcgt
gctgccgatggcagtatgcgcgatgcactcagtttgaccgatcaagcgatcgctatgggg
caggggcaaattaccaccgaaacggtcagcgcgatgctgggaacgctggatgatgaccag
ccgctggcgttaattgaggcgttggttgaggccgatggtcagcaggtgatggcgttattg
aaccaggcggcatcacgcggcgtagagtgggaagcgctactagtagagatgctacgtttg
ctgcaccgtatcgccatggtgcaactccagccctccgcgttaggagatgagtttgcaatg
attgagcaacgcctgcgtgaattggcgcgtgtgctgccgccggcggacgttcagctctac
taccaaacgctgttagtggggcgaaaagagttaccgctggcgccggatcggcgcatgggc
gttgaaatgacgctgttgcgtgcgttggcgtttcatcctgatgcggtgattgccgagccc
gttgcgcgcccgagtatgattccgcagacatcgccgtcagcgacctctgccgaggcacct
cgtcctgcgccggtaccttcaggctcgccgccgcctgccgaagcgccgacggcgcatcta
ccggataccacacatcagctactccaggcgcgcactcaattgatgcgtcagcaaggagta
aacaaaccaaaaaagagtgaaccggcggcgcaaaatgcgcggccggcaagctcggccctg
gagcgtctggcgtcggttaccgaacgtggtcagcagcaacgccaatccgcgcaagcatcc
gccgccgtagcggtaaagaaagaggcatatcgttggaaagcgcaaactgtgccggtggag
gcgcccgcgccggttgccacgcctaaagcgctacgctcggcgttagaacatgaaaagacg
ccggaactggcagcgagattgcaggaagaagcccagcaacgtgatagttgggcggcagag
gtggcaagtttaaccctgccgaaactggtgcaacagttggcgcttaatgcctggaaagag
caaactgagcagggtgtctgccttcatttgcgctccacccagcgccatctgaactccgca
tcggcgcaacaggtgctggcagaagcgctaagcgccgcggctgcgcagaaggttgaactc
actatcattgaagatgataatccggcggtgttaacgccgctggagtggcggcaaaaaatt
tatgaagagaaactggcgcaggcgcgtcagtcgataattgcggatacgcatattcagact
ctacgtcggttttttgacgccgatgtagatgaagagagtattcgccccgtttga
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