Paramixta manurensis: PMPD1_1468
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Entry
PMPD1_1468 CDS
T10259
Name
(GenBank) Putative DNA-3-methyladenine glycosidase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pmak Paramixta manurensis
Pathway
pmak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMPD1_1468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmak03000
]
PMPD1_1468
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_1468
Enzymes [BR:
pmak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PMPD1_1468
Transcription factors [BR:
pmak03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PMPD1_1468
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMPD1_1468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QKJ86424
UniProt:
A0A6M8UA34
LinkDB
All DBs
Position
complement(1530062..1531534)
Genome browser
AA seq
490 aa
AA seq
DB search
MIDQNAAYQALTSRDARFDGVFFVGVTSTGIYCRPICPVKPPRKENCLFFASAEAAEKAS
FRPCLRCRPELAPGNAPVDNAHRIADLLIQRIEEGLIEQVGNLEGIAAQFNLSLRQLRRI
VQKELGVSPLELRQTRRLLLAKQLLTETRLPITEVAFASGFASLRRFNDVFNACYRMPPG
RLRKEAGEASHGIIESETSCLQLSYRPPYDWSAMLAFLQLRALKEVEIVDDQSYTRTVRL
GAYRGWVRVTQVPGKHALQVEFTHSLIGALPALLRRLRHLFDLNAHPDSIDRHLQQDPLL
RDSISKNPGLRVPGAFDGFEMTIRAILGQQITVKAATTLGGRFVNAFGESINTPFPSLTR
LTPLAGRVATATLDDIASLGIVSARSRCIMALAQTCASGELVLDASAHPEGMIAQLLALP
GIGNWTAQYIAMRALRWPDAFPADDIAVRNNLGGVSAKQAEALSVGWQPWRSYAVLHIWK
NLTPEKQKQG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcagaatgcagcgtatcaggcgctaacgtcgcgcgatgcgcgcttcgatggc
gttttttttgtcggcgtgacgtcaaccggtatctattgtcgcccgatttgcccggtgaag
ccaccacgcaaggaaaactgcctgtttttcgccagtgccgaagccgcagagaaagcctca
tttcgcccctgcttacgctgtcgacctgaattagcgccgggtaatgctccggtcgataat
gcgcaccgcatcgctgatttactcattcaacgcattgaggaagggctaatcgaacaggtt
ggtaatttggagggtattgccgcacagttcaaccttagcctacgacaattgcggcgtatc
gtacaaaaagagttgggcgtttccccactggaactcaggcaaacacgtcggctgttactc
gctaaacaattgttgaccgaaacccgtttgccgatcaccgaggtcgcctttgccagcggc
tttgccagtttgcggcgctttaatgatgtgtttaatgcctgctatcggatgccgccgggc
aggttgcgcaaagaagccggtgaagcttcgcacggcatcatcgagagcgaaacctcctgt
ctacagctaagttatcggccgccttatgattggtcggcgatgctggcttttcttcaacta
cgtgcgctaaaagaggtcgagatcgttgatgaccaaagctatacccgcaccgtacgtctg
ggagcttatcgcggctgggtacgcgtaacgcaagtgccgggcaagcatgctttacaggtg
gagtttacccattcgttgatcggcgcattacctgcgttgttgcggcgtttacgtcatctg
ttcgatcttaatgcgcatcctgacagcatcgaccgtcacctacagcaagatcccttattg
cgtgacagtattagcaaaaatcctggcttgcgggtaccgggcgcatttgatggttttgaa
atgacaatacgggcgattctcggccagcaaatcacggtaaaagcggcaacgacgctgggc
ggtcggtttgttaatgcctttggcgagagtatcaatacgcctttcccgtcgcttacccgg
ctgacgcctttagcggggcgcgtggcgaccgctacgcttgatgatattgccagcctcggc
attgttagcgcacgttcacgctgcattatggcgttagcgcagacctgtgcctcgggagaa
ctggtattggatgccagtgctcatcctgaagggatgattgcacaattacttgcgttaccg
gggattggtaactggacggcgcaatatatcgcaatgcgtgccttacgttggcctgatgcc
tttccggccgatgatattgcagtgcgtaataatttgggtggcgtgagtgcgaaacaggcg
gaagcgttgtctgtcggttggcaaccgtggcgtagttatgcggtgttgcatatttggaaa
aatttgacgccggagaaacagaaacagggctag
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