Paramixta manurensis: PMPD1_2322
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Entry
PMPD1_2322 CDS
T10259
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmak Paramixta manurensis
Brite
Enzymes [BR:
pmak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PMPD1_2322
Transfer RNA biogenesis [BR:
pmak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMPD1_2322
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GFIT
Other DBs
NCBI-ProteinID:
QKJ87266
UniProt:
A0A6M8U943
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Position
2440628..2442562
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
VAAVQTDKDREIVEPEKLLEPFLTRFVGRVQKKDDRLSIVPDHPLLREAISCRPDRALTH
DFQAGDWAVAEMRRHPLKGDRGFYAELTQFITHNDDHLAPWWVTLSRHNLEREAPDVTFS
EMLDENLTREDLTALEFVTIDSASTEDMDDALYVEETADGTLRLTVAIADPTAYVAPGSE
LDTIAAERAFTNYLPGFNIPMLPRALSDDVCSLHPHVRRPVLACRVTVAADGTLANDVHF
FAAWIESKAKLVYDHVSDWLENSGEWQPETDAVANQIRLLHRLCLSRMEWRKNHALVFKD
RPDYRFLLGDKGEVLDIVAEPRRIANRIVEEAMIAANICAATELRDKLGFGIYNVHLGFD
AVNAEQAAAVLANNGVTVDPATMTTLEGFRQLRRQLDAQPTQFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIRGEEVARPADDVTVKMGERRRLNRM
AERDVGDWLYARFLEKAVQNGSRFSAEIIDISRGGMRVRLLDNGAIAFIPAPFLHAVRDE
LVCSQESGTVQIKGEVVWRVTDVIEVTIAEVRMETRSIVARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagcttaaagagaagcttcactcccagacgccg
cgcgttgaaggggtagtcaaaggtacggaaaaagggttcggctttttagaggtcgacgcg
caaaaaagctactttattccgccgccgcagatgaaaaaagtgatgcatggcgatcgcgtt
gtcgccgccgtgcaaactgacaaagatcgcgagattgtcgagccggaaaaactgcttgag
cctttcctgacgcgcttcgtaggccgggtacagaaaaaagatgatcggttatcgattgtg
ccggaccatccgttactgcgtgaagccatttcttgccgtcccgatcgtgctttaacccat
gattttcaggctggcgactgggccgtcgccgagatgcgccgccacccgctgaaaggcgat
cgcggcttttacgcggaactaacccaatttattacccataacgatgaccatttggcaccg
tggtgggtgacgttgtcacgccacaatctggagcgtgaagcgccagacgtgacatttagt
gagatgttggacgaaaacttgacgcgtgaagatctcaccgcgctggagttcgttaccatc
gacagcgccagcactgaagatatggatgatgcgctgtacgtcgaagaaactgctgacggt
accctgcgcctcaccgtcgccattgccgatcctaccgcttatgttgcgccaggtagtgag
ctggatactatcgccgccgagcgcgcgtttaccaactacctgccgggctttaacattccg
atgttaccccgcgccctgtccgacgatgtttgctcgctgcacccacacgtacgccgcccg
gtgctggcctgccgcgtaaccgtcgccgcggatggtacgcttgccaacgatgtgcatttc
tttgccgcgtggatcgagtcaaaagccaaactggtatatgaccatgtttccgattggctg
gaaaatagtggcgagtggcagccagaaaccgatgctgttgctaaccaaatccgcctgctg
caccgtttgtgtctgtcgcgtatggaatggcgcaaaaatcatgcgttggtctttaaagac
cgtccggactaccgcttcctgttaggtgacaaaggcgaagtgctggacattgttgccgag
ccacgccgcatcgctaaccgcattgtggaagaggcaatgattgccgccaatatctgcgcc
gcgacagagttacgcgataagttgggctttggcatttataacgtccatctcggttttgat
gcggttaatgccgagcaagccgcggcagtgctagcgaataatggcgtcactgttgatccc
gccacgatgacgacgctggaagggttccgtcaattgcgccgccagttagatgcccaaccc
actcaattcctcgacagccgtattcgtcgcttccagtcctttgcggaaataagcaccgaa
cccggcccacactttggccttgggctggaagcttacgcaacctggacgtcgccgattcgt
aaatatggcgatatggtcaaccatcgcctgctgaaagcgattattcgcggagaggaagtg
gcacgacctgctgatgatgtcacggtcaaaatgggcgaacgtcgccgtttaaatcgtatg
gctgagcgcgatgtcggtgattggctctacgcgcgtttccttgaaaaagccgttcagaat
ggcagccggtttagcgctgaaatcatcgatatttcacgcggcggtatgcgcgttaggctg
ctggataacggtgctatcgcctttattcccgcccctttcctacatgcggttcgcgacgag
ctggtgtgcagccaggagagcggtactgtacaaattaaaggtgaagttgtctggcgcgtt
accgatgttattgaggtcaccattgccgaagtgcgcatggaaacccgtagtatcgtagcc
cgtcctgtcgcctga
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