Paramixta manurensis: PMPD1_2325
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Entry
PMPD1_2325 CDS
T10259
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pmak Paramixta manurensis
Pathway
pmak02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PMPD1_2325
Enzymes [BR:
pmak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PMPD1_2325
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QKJ87269
UniProt:
A0A6M8UC49
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All DBs
Position
2445260..2447245
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AA seq
661 aa
AA seq
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MIDDRGQTLLYSLFGTTSPHWHLSADSDALNFSEDEAAQVNLAVALTPPQASLLRSMAVI
TSSISLTVSLRGTEIAMHFVGRKVNQSEWAGTASAWGDTSSVARDLTHGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLKEQEVIGRNVFQLFMTRQEAAASRRNIASFFREG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHQLITEALDNPQGRQTGLVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LTCLGKQQTLARLGGDEFLVLAVNTTQSELESLASRILDRLRQPFRIGLLEVYTGSSIGI
AIAPQHGEDRESLIRNADTAMYNAKENGRGKFCLFSAEMNQRVFEYLWLDTNLRKALEQQ
QLIIHYQPKLDRNGKVRGAEALVRWQSPERGLVAPGDFISYAEESGLIVPLGRWVMLTVL
AQIIAWRQQGIDLRVAVNVSARQLIDQSIYTDLKQALQESGLNQCPIDIELTESCLIENE
RQALMLMKQFQELGAEVHLDDFGTGYSSLSQLARVPIDAIKLDQSFVRDVNTQPVAQSLV
RAIVAVAKALNLQVIAEGIETVEEEAFVMNNEVDIRQGYLYAKPMPAEQLEHWLIQHPEY
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgatcgagggcaaacactgctatatagcctgtttggcaccaccagccctcac
tggcacctatccgccgatagcgatgcgcttaatttttcggaagatgaagcagcccaagtt
aacctcgccgtagcgcttacgccgccacaggccagtttgttgcgctcgatggcggtcatc
acctccagtattagcctcactgtctctttgcgcggaaccgaaatcgcgatgcattttgtc
ggacgtaaggtgaatcagtcagagtgggcaggcacagcttcagcatggggtgacacctct
tccgtcgctcgcgatttgacgcatggcctctcctttgctgaacaggtggtgtctgaggcc
aattcggtgatcgttatcctcgatcaacgcggtaacatccaacgctttaaccgtctgagt
gaagagtataccggcctgaaagaacaagaagtgattggccgtaacgtgttccaacttttt
atgacgcgtcaagaagcggcggcgtcacggcgtaatatcgccagttttttccgcgaaggc
agttcatacgaagtggagcgctgggttaaaacccgtaaaggtcagcgcctatttctgttc
cgcaataagtttgttcatagcggcagcggtaagaatgaaattttcctcatctgctccggt
accgacattactgaagaacgtcgggcgcaggaacggcttcgcgtgctggcgaataccgac
accattaccggtttacctaatcgcaacgcgattcatcagttgattactgaagcgttggat
aatccgcaaggaaggcaaaccggcttggtgtaccttgacctcgataattttaaaaaggtg
aacgatgcctacgggcatatgtttggcgaccaattattgcaagccgtatcgctggctatt
ctgacctgtctcggtaaacagcaaacgctggcccgtcttggcggcgatgagtttttggtg
ttagcggtaaataccacccaaagcgagctagaatcactcgcctcgcgtattctcgaccgt
ttacgtcaaccgttccgcatcggcctgttagaagtgtataccggcagctcaatcggcatc
gcgattgcaccgcagcatggcgaggatcgggaaagcctgatccgcaatgccgataccgcg
atgtacaacgctaaagagaatggccgcggcaagttttgcctgttttctgccgaaatgaac
cagcgcgtattcgaatacttgtggctggatactaacctgcgtaaggcgctggaacagcaa
caattaattattcactatcagcctaagctcgatcgcaacggtaaagtgcgcggcgccgaa
gcgctggtacgctggcaatcacctgagcgaggtttggtcgccccgggcgattttatttcg
tatgcggaagagtccgggctgattgttcctcttggccgttgggtgatgcttaccgtactg
gcgcaaattatcgcctggcgtcaacaaggcattgatttgcgcgtggcggtgaatgtttcc
gcgcgtcagctcatcgatcagagcatctatactgacctaaaacaggcattacaagagagc
gggttaaaccaatgcccgattgatattgagctgaccgaaagctgcctgattgaaaatgaa
cgccaggcgttgatgctgatgaagcagttccaggagttgggcgcggaagtgcatcttgat
gatttcggtaccggttactcttcgctctcacaattggcgcgcgtgccgattgatgcgatt
aagctcgaccaaagttttgtgcgtgatgttaatactcagccggttgcgcagtcattggtg
cgagccattgtcgcagtggcgaaggcgttgaatttgcaggtgattgccgaagggattgag
accgtggaagaagaagcttttgtgatgaacaacgaggtggatattcgccaaggatattta
tatgcgaagccaatgcccgcagaacaactcgaacactggcttattcaacatcctgaatat
caataa
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