KEGG   Paramixta manurensis: PMPD1_2808
Entry
PMPD1_2808        CDS       T10259                                 
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pmak  Paramixta manurensis
Pathway
pmak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PMPD1_2808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmak03400]
    PMPD1_2808
Enzymes [BR:pmak01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     PMPD1_2808
DNA repair and recombination proteins [BR:pmak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PMPD1_2808
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PMPD1_2808
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PMPD1_2808
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: QKJ87745
UniProt: A0A6M8UAR1
LinkDB
Position
2928128..2929552
AA seq 474 aa
MSNDKPRTFLFHDYETFGKSPSLDRPAQFAGIRTDEDFTIIGEPEVFYCQPADDYLPQPE
AVMITGITPQQAIARGVNEAEFARRIHALFSEPNTCVVGYNNVRFDDEVTRNIFYRNFYD
PYAWSWQHGNSRWDLLDVMRACYALRPEGITWPENEAGLPSFRLEHLTKANGVEHANAHD
AMSDVYATLAMAKLVKEKQPKLFSFLYSHRTKQKITTLIDIPQMKPLVHISGMFGALNGN
TSWIAPLAWHPDNRNALITCDLAGDITPLLELDATTLRERLYTRRDALGTHSPVPIKLVH
INKCPVLAPANTLRPEDAERLGIDRQRCLDNLTLLRQHPEVREKVVTLFAEAEPFTPSDD
VDAQLYDGFFSDADKSAMAIIQQTNPTNLPALDLTFNDRRIEKLLFRYRARNFPGTLDDS
EQQRWLQHRREALHEGRVESYLLELDALFALHQGNAEKEAQLKALFEYARQLVS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagcaacgataaaccacgcaccttcctgttccacgactatgaaacctttggcaaaagc
ccctcgcttgaccggcccgcgcagttcgccgggatccgaaccgatgaggatttcactatc
attggcgaaccggaagtgttctattgccagcctgctgatgattatcttccgcagcctgaa
gcggtgatgattaccggcatcacgccgcagcaggcgatagcgcgcggcgttaacgaagcc
gagttcgcccgccgcattcatgccctgtttagcgagccaaatacctgtgtggtgggctat
aacaatgtccgtttcgatgatgaagtgacgcgtaatattttttatcgtaacttctacgat
ccttacgcctggagctggcaacacggtaattcgcgctgggatctgcttgatgtgatgcgc
gcgtgctatgcactgcgcccggagggaattacctggccggaaaatgaagcgggcctcccc
tcttttcggcttgagcatctgaccaaggctaacggcgtggaacatgccaatgcgcatgat
gcgatgtccgatgtgtacgccacgctggcaatggcgaagctggttaaagaaaagcagccg
aaactgttctcttttctgtacagccaccgcaccaaacaaaaaatcaccacgctgattgat
attccgcaaatgaaaccgttggtgcatatttccggtatgtttggcgcattgaatggcaac
accagttggatagcgccgcttgcctggcatccggacaaccgtaacgcgctgattacctgt
gatttagccggcgatattacgccgctactggaactggatgccacgacgcttcgcgagcgg
ctttatacccgccgcgacgcgctgggcacccattcaccggtgccgattaaactggtacat
atcaataaatgtccggtactggcgcccgccaatacactgcgccccgaagacgccgaacgt
ctcggtattgatcgccaacgttgcctcgacaatctgacgctgctacgccaacatcctgag
gtgcgtgaaaaagtggtcacgctgttcgcggaagccgaaccctttactccgtcagatgac
gttgatgcacagctttatgacgggttctttagcgatgccgataaatccgcgatggcgatt
attcaacaaactaacccaaccaatctgcccgcgctggatttaacctttaacgatagacgt
attgaaaagttgttatttcgttatcgcgcgcgcaactttcccggcacgctggatgatagt
gagcagcaacgttggcttcagcatcgccgtgaagcgctgcatgaggggcgggtggaaagt
tatttactggaacttgacgcgctgtttgccctacaccaaggcaacgcagagaaagaggcg
cagcttaaagcgctatttgaatacgctcgccagctggtttcctga

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