Paramixta manurensis: PMPD1_3320
Help
Entry
PMPD1_3320 CDS
T10259
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmak Paramixta manurensis
Pathway
pmak00260
Glycine, serine and threonine metabolism
pmak00460
Cyanoamino acid metabolism
pmak00630
Glyoxylate and dicarboxylate metabolism
pmak00670
One carbon pool by folate
pmak00680
Methane metabolism
pmak01100
Metabolic pathways
pmak01110
Biosynthesis of secondary metabolites
pmak01120
Microbial metabolism in diverse environments
pmak01200
Carbon metabolism
pmak01230
Biosynthesis of amino acids
pmak01240
Biosynthesis of cofactors
pmak04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PMPD1_3320
09102 Energy metabolism
00680 Methane metabolism
PMPD1_3320
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PMPD1_3320
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PMPD1_3320
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PMPD1_3320
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PMPD1_3320
Enzymes [BR:
pmak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PMPD1_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QKJ88243
UniProt:
A0A6M8UT17
LinkDB
All DBs
Position
complement(3468133..3469386)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKRDMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVVPYGIDETGKIDYDDLAAQAKKHQPKMIIGGFSAYSGI
CDWAKMREIADSIGAWLFVDMAHVAGLIAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLERGYKVVSGGTHNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVRELAGWMADVLDNIHDEGNIERVKQKVLEICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgatatgaacattgccgattatgatgccgaattgtggcaggcgatggag
caagaaaaggtgcgtcaggaagagcacatcgaactgattgcttcagaaaactacaccagc
ccgcgcgttatgcaggcgcaaggttcgcagctcaccaataaatacgccgaaggctatcct
ggcaaacgctattacggcggctgtgaatatgtggatatcgttgaacaattagcgatcgat
cgcgcaaaagaactgtttggcgccgattatgccaacgtccagccgcattcaggctctcag
gctaattttgcggtttacactgcgctgctgcagccgggcgatactattcttgggatgaac
cttgcccacggtggtcatctgactcatggctcaccggtaaacctctccggcaaactgtat
aacgtggtgccgtacggtatcgatgaaaccggcaagatcgattatgacgatttggcggcc
caggcgaaaaagcatcagcctaaaatgatcatcggcggtttctccgcttactccggcatt
tgtgactgggcaaaaatgcgtgaaatcgccgatagtattggtgcctggttgtttgttgat
atggcgcacgttgcaggcctaatcgccgctggcgtctatccgaacccggttccacacgca
cacattgtgacgaccactacgcataaaacgctggccggtccgcgcggcggtctgatttta
gccaaaggcggcgatgaagagttgtacaaaaagctcaactctgcggtgttcccgggcggc
cagggcggcccactgatgcacgttatcgcgggtaaagcggtggcgctgaaagaagcgatg
gagcctgagttcaaggtttaccagcagcaagtggctaaaaacgcgaaagcgatggtcgaa
gtgttcctggaacgcggctataaagtggtttctggcggcacccataatcacctgttcctg
ctggacctggtggataaaaacttgaccggtaaagaggccgacgccgcattggggcgtgcg
aatatcaccgtcaacaaaaacagtgtccctaacgatccgaagagtccgtttgtcacctcc
ggcattcgtatcggttctcctgcagttacgcgccgtggttttaaagaggccgaagtccgt
gaactggcaggctggatggcggatgtgctggataacattcacgacgaaggcaacatcgaa
cgcgtgaaacagaaagtgttggaaatctgcgcacgtttcccggtttatgcctaa
DBGET
integrated database retrieval system