Paramixta manurensis: PMPD1_3334
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Entry
PMPD1_3334 CDS
T10259
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pmak Paramixta manurensis
Pathway
pmak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMPD1_3334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_3334
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PMPD1_3334
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PMPD1_3334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QKJ88257
UniProt:
A0A6M8UIM2
LinkDB
All DBs
Position
complement(3484945..3485682)
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AA seq
245 aa
AA seq
DB search
MDGWQRAFVLHGRPYSETSLLLDLFTESHGRIRVLAKGARSKRSALKGALQPFTPLLVRW
SGRGEVKTLRSAEAVSLALPLSGITLYCGLYVNELLSRVLEQETAFSELFFDYLNCLQTL
AAASGSPEPALRRFELAMLGHLGYGVDFLHCAGSGESVSDEMTYSYREEKGFIASMVINQ
RSFTGRELRALYAREFPDADTLRAAKRFTRMALKPFLGGKPLKSQELFRQFIPKKPPAAD
PALSD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggatggctggcaacgcgcgtttgtcctgcatgggcgtccttatagcgaaaccagcctg
ttactcgacctgtttaccgaaagccatgggcgcatacgggtgctggcgaaaggcgcccgt
tctaaacgttccgccctcaaaggcgcgctgcaacctttcactcctctattagttcgctgg
agcggacgcggcgaagttaaaacgttgcgtagcgccgaagccgtctcgctggcgcttcct
ctcagcggcatcacgctttactgcggtctctacgtcaatgaactcttgtcgcgcgtatta
gagcaggagaccgccttttccgaactgttctttgattacctcaattgcctgcaaacattg
gccgccgccagcggttcgccagagcccgcattacgtcgctttgaattggcgatgctgggc
cacctcggctacggcgttgatttcctccactgtgcggggagtggcgagtcggttagcgat
gagatgacgtatagctaccgggaggagaaggggtttatcgccagcatggtgattaatcaa
cgcagcttcaccgggcgtgaactgcgggcgttgtatgcgcgcgaatttcccgatgctgat
acgctacgcgccgctaagcgctttacgcgcatggcattgaagcctttcctcggtggtaaa
ccgttaaaaagtcaggaactcttccgtcagtttataccgaaaaaaccgccggcagcggat
cccgctctcagcgattag
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