Paramixta manurensis: PMPD1_3336
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Entry
PMPD1_3336 CDS
T10259
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pmak Paramixta manurensis
Pathway
pmak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PMPD1_3336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmak03019
]
PMPD1_3336
03009 Ribosome biogenesis [BR:
pmak03009
]
PMPD1_3336
03036 Chromosome and associated proteins [BR:
pmak03036
]
PMPD1_3336
Enzymes [BR:
pmak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PMPD1_3336
Messenger RNA biogenesis [BR:
pmak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PMPD1_3336
Ribosome biogenesis [BR:
pmak03009
]
Eukaryotic type
90S particles
RNase
PMPD1_3336
Prokaryotic type
rRNA processing factors
PMPD1_3336
Chromosome and associated proteins [BR:
pmak03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PMPD1_3336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QKJ88259
UniProt:
A0A6M8UEP7
LinkDB
All DBs
Position
complement(3486592..3487272)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINKLQRKLGYTFTHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILSWYQTRLDQISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMADPVVGTGSSRRKAEQAAAEQALIKLGLE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaataagcttcagcgaaagctgggctacacttttactcatcag
gaattgctgcaacaagcattaacgcaccgtagcgctagcagtaaacacaatgaacgtctg
gagtttcttggcgattccattctcagctatgttatagcgaatgcgctttaccaccgcttt
ccgcgtgtggacgagggtgatatgagccgtatgcgcgcgacgctggtgcgtggtaacacg
ttagcggaaatggcgcgcgagttcgatctgggtgagtgtttacgtttggggccgggcgag
ctaaaaagcggcggctttcgtcgtgaatctattctggccgataccgttgaggcattaatt
ggcggggtattccttgatagcgacattcagacggttgaaaaactgatcctgagttggtac
caaacgcgccttgaccaaattagcccaggcgataaacagaaagatcccaaaacgcgtctg
caagagtatttgcagggtcgtcacttaccgctcccctcctatttggtggtgcaggttcgc
ggcgaagcgcatgaccaggaatttaccattcactgtcaggtaagcggcatggccgatccg
gtggttggcaccggatcaagccgtcgtaaagctgaacaggcagccgccgaacaggcgctg
attaagttaggactcgaatga
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