Paramixta manurensis: PMPD1_3569
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Entry
PMPD1_3569 CDS
T10259
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmak Paramixta manurensis
Pathway
pmak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMPD1_3569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_3569
Enzymes [BR:
pmak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PMPD1_3569
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMPD1_3569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QKJ88485
UniProt:
A0A6M8UCZ2
LinkDB
All DBs
Position
complement(3745883..3749269)
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AA seq
1128 aa
AA seq
DB search
MFTVYHSNQLDVLKTLAAYLIENEPLRDPFQPEVVLVQSPGMAQWLQMSLAQQFGIAANI
AFPLPASFIWDMFVRVLADIPEESAFTKAAMSWKLMSLLPAMLDRPEFSALRHYLADDQD
QRKLFQLSSRVADLFDQYLVYRPEWLNRWEKGELVADIGDAQQWQAPLWAALVDYTRQLD
QPQWHRANLYSRFIQRLDSATQRPPGLPDRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRHYWGDIQDYAFLAKLQSRRRQHHQSAGESALFREPAQAPSLFNADGEQQLTNPLL
ASWGKLGRDNLWLLAQMEAREIDAFVEIPADNLLHSVQHDLLELEDNAVIGLTAETLSSS
RTKRLLDPQDRSISVHVCHSPQREVEVLQDRLLAMMEADPQLTARDIIVMVADIDAYTPF
IQAVFGNAPAERYLPFAISDRRASHAHPALLAFINLLSLPDSRFASEEILALLEVPAVAA
RFAIDEEGLRRLRHWVSEAGIRWGLDDEAVRALALPATGQHTWHFGITRMLLGYAMESES
GDWQGILPYDESSGLIAELAGNLAELLMQLNQWRHTLAQPRTLEAWLPLCRSLLEAFFSA
DADTEAALALIEEQWQQVISYGMEAAYHQTVPITLLRDELASRLDQQRISQRFLAGPVNF
CTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMSQKPKKGDRSRRDDDRYLFLEAII
SAQQQLYISYIGRSIQDNTERYPSVLVSELVEYIGQSFCLPGDEAQDVDSSAQHVLAHLH
HQHSRMPFDADNFSDESEFRSFAAEWLPAARAEGQPHPPFMQALPPLEMTELNVERLIGF
WRHPVRAFFTLRLGVAFTLEDMELPDAEPFVLDALDRYQVNTRLLNALINGETTERLFQF
YRSAGALPYGAFGELFWQQQEEEMSALALRVREYRGESDNLEVSLQVGGVHLSGWLPQVQ
TEGLLRWRPGVLNFTDGLTLWLEHLLYCAMGGKGHSRMLGRKESQWCFAAINRDEALAQL
AEFIAGYQQGMRTPLLLLAKSGGAWLAASYDRQSDQLQWDEATQITARGKLLSAWQGNYQ
LEGEGSDPWLQRLFRTLDEERVTEIIYEAEKWLLPLLRFNCAAEKSDE
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcattctaatcagcttgatgtactgaaaacgctggcagcgtatctc
attgaaaatgagccgttacgcgatcctttccagcctgaagtggtgctggtgcaaagcccg
gggatggcgcaatggttacaaatgtcactggcgcagcaattcggtattgcagccaatatt
gcttttccgctaccggccagttttatctgggatatgtttgtgcgtgtcctggcggatatc
ccggaagagagtgcgtttaccaaagctgctatgagctggaaactgatgtcgttgctgcca
gccatgctggatcgacctgaattctccgcattgcggcactacctggcggatgatcaggat
cagcgcaaactgttccaactttcttcgcgtgttgcggacctgttcgaccaatatctggtc
tatcggccggagtggctaaaccgctgggaaaagggggagttggttgcagatattggcgac
gcgcagcaatggcaggcacctctctgggcggcgttggttgactacacccgccagcttgac
caaccgcaatggcatcgcgccaatctgtattcgcgttttattcaacggctggattccgct
acgcaacgcccgccagggttgcctgaccgggtatttatttgcggtatttccgcactaccg
ccggtttatttacaggctcttcaggcgctgggtaaacatattgatattcatcttctgttt
actaatccttgccgccattactggggagacattcaggattatgcgtttctcgcgaagctg
caaagccgccgtcgccagcatcatcaatcggcgggtgaaagtgcattgtttcgtgagccc
gcgcaggcgccatcactgtttaatgccgacggcgaacagcaactgaccaacccactattg
gcatcatggggcaaactggggcgggataatctctggctattggcgcaaatggaagcgcgc
gaaattgatgcttttgtcgagatcccggcggataacctgctacacagcgtgcagcatgac
ctgctggagttagaggataacgcggttattggcctgacggcggaaacgctctccagtagc
cggacaaagcgtcttctcgacccgcaagaccgttcaatctctgtgcatgtgtgccatagc
ccacagcgtgaggtcgaagtgttacaggatcgtttgctggccatgatggaggccgatccg
caactcacggcgcgagatatcatcgtgatggtggccgatattgatgcctatacgccgttt
attcaggcggtgtttggcaatgctcctgccgagcgttacctgccgtttgcgatttccgat
cggcgcgccagccatgcgcatcctgccttactggcctttattaatttgttaagcctgcca
gacagtcgtttcgccagtgaggagatactagcactgctggaggtcccggccgttgccgcg
cgttttgcgatagatgaggaagggctgcgtcgtttacgtcattgggtcagtgaagccggt
attcgctgggggctggatgatgaggcggtgcgggcgttggcgctaccggcaaccgggcaa
catacctggcattttggtattacacgcatgctgcttggctatgcaatggagagcgagagc
ggcgactggcaaggcattttgccctatgacgaatccagcgggttgattgccgaactggcg
ggcaatctggcggaattactgatgcagcttaatcaatggcggcacacgctggcgcaaccg
cgcacgctggaagcgtggttgccgctttgccgttcgctgttggaggccttttttagcgcg
gatgccgataccgaagccgcgctggcgctgattgaagagcagtggcaacaggtgattagc
tacggtatggaagcggcctatcaccaaacggtgcccatcactctgttgcgcgatgagttg
gcctcaaggcttgaccagcaacggattagtcagcgctttcttgccggcccggtcaatttc
tgtacgctgatgccgatgcgttcaatcccctttaaagtggtatgcctgctggggatgaat
gacggggtctatccgcgcaccttaccgccgctggggtttgacttgatgagccagaaaccg
aaaaagggcgatcgcagccgccgcgatgatgaccgttacttgtttttggaggcgatcatc
tccgcgcaacagcaactgtatattagctatattgggcgctcaatccaggataatacggaa
cgttatccgtcggtgctggtcagtgaattagtggagtatatcgggcaaagtttttgtttg
ccgggcgatgaagcgcaagacgtcgatagcagcgcgcagcatgtgcttgcgcacttacat
catcagcattcgcgcatgccgtttgatgccgataattttagtgatgagagcgagttccgc
agttttgctgcggaatggttacccgccgcccgcgcggaagggcagccacatccgcctttt
atgcaggcgttgccgccgcttgagatgaccgagttgaacgttgaacggttgatcggtttc
tggcgccatccggtgcgggcgttttttaccttgcggctgggcgtggcctttacgcttgaa
gacatggagttgcctgacgcagagccttttgtgctggatgcgctggatcgctatcaggtg
aatacgcgtttgttaaatgcgctgatcaatggtgagacaacggaacggctgtttcagttt
taccggtcggcgggtgcattaccttacggtgcttttggcgagcttttttggcaacagcaa
gaagaggaaatgtcggcattggcgctacgcgtgcgtgaataccgtggtgagagcgataac
cttgaagtttcgctgcaagtggggggcgttcatctcagcggttggctgccgcaggtgcaa
acggaagggttattacgttggcgccccggcgtgcttaattttactgatggtctaacgttg
tggctggaacatctactctattgcgcgatgggcggcaaaggccacagtcgcatgttgggg
cgcaaagagagccaatggtgttttgccgccatcaaccgtgatgaggcgttggcgcaactg
gctgagtttatcgccggttatcaacaggggatgcgtacgccgttattattattagcaaaa
agcggcggcgcatggcttgcggccagctatgatcgccaaagcgaccaattgcagtgggat
gaggccacgcaaattactgcgcgcggaaagttgttaagtgcatggcagggaaattaccag
ctagaaggcgaagggagcgatccctggttgcaacgtttattccgtacgctggatgaagaa
cgggtcaccgagattatctatgaggccgaaaagtggttattgccgctattgcgttttaat
tgcgcggcagagaaaagtgatgaatag
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