Paramixta manurensis: PMPD1_4203
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Entry
PMPD1_4203 CDS
T10259
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmak Paramixta manurensis
Pathway
pmak03030
DNA replication
pmak03410
Base excision repair
pmak03420
Nucleotide excision repair
pmak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMPD1_4203
03410 Base excision repair
PMPD1_4203
03420 Nucleotide excision repair
PMPD1_4203
03440 Homologous recombination
PMPD1_4203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmak03032
]
PMPD1_4203
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_4203
Enzymes [BR:
pmak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMPD1_4203
DNA replication proteins [BR:
pmak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PMPD1_4203
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PMPD1_4203
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMPD1_4203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Myotub-related
Motif
Other DBs
NCBI-ProteinID:
QKJ89105
UniProt:
A0A6M8UEW7
LinkDB
All DBs
Position
complement(4437871..4440657)
Genome browser
AA seq
928 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYKPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLAVSGVEADDVIGT
LALQAEQQGRAVLISTGDKDMAQLVTPNITLINTMNNTVLGPEEVTEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGMSAIYDQLDKVVGLSFRGAKTMAAKLAENE
EVAFLSYQLATIKTDVELEVTCEELTVSEPSVEALLELFKHYEFKRWLSDLEEGKWLQGK
KSNLTAQKKRVEKTTVQPEAVSVLSADGYVTILDDKTFDEWLARLQNSGLFAFDLETNSL
DTISAEIIGLSFAVAPGEAAYLPVAHDYLDAPDQLDRKQVLAKLKPLLEDNRLLKVGQNL
KYDRGVLKNYDIELGGIKFDTMLESYMLNSVAGRHDMDSLASRWLNHKTVTFEEIAGKGK
NQLTFNQIALEQAAHYAAEDADVTLQLHLKMWPELENQAGPKAVFEQIEMPLLTVISRIE
RNGVLIDQNILAAHSKELTSRLSELELKAHELAGEPFNLSSTKQLQTILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPHTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPKGHRIVAADYSQIELRIMAHLSQDK
GLLGAFAEGQDIHRATAAEVFGVALEKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEAKKYMDLYFERYPGVLQYMENTRQLAAEKGYVSTLDGRRLYLPDIQSGNAIRRKAAER
AAINAPMQGTAADIIKRAMIAVDEWLLTPEAVGVKMIMQVHDELVFEVEQSVVESANQKI
RQLMESSMTLDVPLRVDVGVGDNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcgcagaaaatccgctgattctggtagacggctcctcttatttatatcgt
gcttaccatgcgtttccgccgctgacaaatagcgcgggcgaaccaacaggcgcaatgtac
ggtgtgcttaatatgttgcgtagcctgttattgcaatataagccgagccatgtcgcggtg
gtgtttgacgccaaaggaaaaacatttcgcgatgagttatttgaacactacaaatctcat
cgtcccccgatgccggatgatttgcgtgcgcagatagaaccactacaccaaatggtaaaa
gccatggggttacctctactggcagtttcaggcgtggaggcggatgacgttattggcaca
ctggcgcttcaggcggaacaacaggggcgcgcggtgctgatcagtactggcgataaagat
atggcgcagttagtgacgccgaatatcacgctgatcaacaccatgaataacaccgtgctc
ggtccggaagaggtcacggaaaagtatggtgtcccgccggagttgatcattgatttcctg
gcattgatgggagactcgtcggacaacattcccggagtgcccggcgtgggtgagaaaact
gcgcaggccttgttgcaagggttaggcggaatgagcgcgatttatgaccagctagataaa
gtggtcgggctttccttccgtggcgccaaaaccatggcggcgaagcttgcggaaaatgaa
gaggtcgctttcctctcctatcaattggccaccatcaaaacggatgtggaattagaggtc
acctgcgaagagctgacggtcagtgaaccaagcgtagaagcgctattagagctatttaaa
cactacgaatttaagcgttggctaagcgatctggaagagggcaaatggctacagggcaag
aaaagtaaccttactgcgcaaaaaaaacgggtggaaaaaaccaccgtacagccggaagcg
gtgagcgtgctctccgccgatggttatgtcaccattttggatgacaaaacatttgatgag
tggcttgcgcggctacaaaatagcggtctttttgcctttgatctggaaaccaactcgctc
gataccatcagcgctgaaattattgggctgtcttttgccgttgcaccgggtgaggccgct
tatttgcccgttgcgcatgattatcttgatgcgccagaccagttagatcgcaagcaggta
ttggcgaagctgaaaccattattggaagataaccggttgctgaaggtaggccagaacctg
aaatacgatcgaggtgtactgaagaactacgatattgagcttggcggcattaaatttgac
accatgcttgagtcatacatgcttaacagcgtggcgggtagacatgatatggacagcctc
gcatcgcggtggttgaaccataaaaccgttacctttgaagagattgccggtaagggtaaa
aatcaactgaccttcaatcagatcgcattagagcaggcggcgcattatgccgcagaagat
gctgatgtgacgctccagttgcatttgaagatgtggcctgagctggaaaatcaggcgggg
ccaaaagcggtgtttgaacagattgaaatgccgctactcacggtcatctcccggattgaa
cgtaacggcgttttaatcgaccagaatatcctggccgcgcactcgaaagagttaaccagc
cgtctatcggagctggaactgaaggcgcatgagttggcgggagaacctttcaacctctct
tccaccaagcaactacaaactatactgtttgaaaaacagggcattaagcccaccaaaaaa
acaccgggcggcgcgccttcaaccagtgaagaagtattggccgagctagcgctggattat
ccgctgccaaaagtcatccttgagcatcgtggtttgtccaaactgaaatcgacctatacc
gataaactgccattgatgattaatccgcacaccgggcgcgttcatacttcttatcatcaa
gcggttaccgcgaccggacgtttgtcttcgaccgatcctaacttgcagaacatcccggta
cgaaatgaagaagggcgtcgtattcgccaggccttcattgcgccaaaagggcaccgcatt
gtggcggcggactattcacagatagagctgcggatcatggcgcacttgtcgcaagataag
gggttgctgggtgcgtttgccgaaggtcaggatatccatcgggcgacggcggcagaggtg
tttggcgtcgcgctggagaaagtgagcggtgagcaacgacgtagcgcgaaggcgattaac
ttcgggttgatttacgggatgagcgcatttggtttatcgcggcaactgaatattggcgcc
ggcgaagcgaagaaatatatggatctttacttcgagcgttatcctggcgtgctgcaatat
atggagaacacgcggcagctagcggcggagaaggggtatgtttccacgctggacgggcgc
cgtctgtacctgccagatattcagtctggtaatgcgattcggcgcaaagcggccgagcgt
gcggcaatcaatgcgccgatgcagggcacggcggcagatattattaaacgtgccatgatt
gcggtagacgaatggctgttaacgccagaggccgtcggtgtaaaaatgattatgcaagtt
cacgatgagctggtgtttgaggtggaacaaagcgtggtggaaagcgctaatcagaaaatt
cgtcaattaatggaaagcagcatgacactggatgtaccgttgcgcgttgatgtgggcgtt
ggcgataactgggatcaggcgcactaa
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