Paramixta manurensis: PMPD1_4246
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Entry
PMPD1_4246 CDS
T10259
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmak Paramixta manurensis
Pathway
pmak03420
Nucleotide excision repair
pmak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMPD1_4246
03430 Mismatch repair
PMPD1_4246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmak03400
]
PMPD1_4246
Enzymes [BR:
pmak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMPD1_4246
DNA repair and recombination proteins [BR:
pmak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMPD1_4246
MMR (mismatch excision repair)
Other MMR factors
PMPD1_4246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
AAA_22
DUF6658
Motif
Other DBs
NCBI-ProteinID:
QKJ89147
UniProt:
A0A6M8UL29
LinkDB
All DBs
Position
complement(4491569..4493731)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPYSIMAV
TFTNKAAAEMRHRIEQLVGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQAMWYINGKKDEGLRPKHIESYGNPIEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRMLAGDT
GRVIIVGDDDQSIYGWRGAQVENIQRFLKDFSGAQTIRLEQNYRSTNTILKAANALISNN
NGRLGKELWTDGADGEAISLYCAFNELDEARFVVNRIKVWQENGGALNDCAILYRSNAQS
RVLEEALLQVSMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQATRELLVEKALAGRAASALQRFIELVDSLAQETSELPLHIQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLLPLQAFLSHAAL
EAGEGQADKWQDAVQLMTMHAAKGLEFSQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMIKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPANHQRMG
TPVTKSDSGFALGQRVRHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYARLESC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcaacagtttgaatgacaaacaacgcgaagccgtggcggcg
ccacgcagcaatctgctggtgctggctggcgcgggtagcggaaagacgcgcgtgctggtg
caccgtattgcctggttactggcggtcgagaactgttcgccctattcgataatggcggtg
acgtttaccaacaaagcggcggcggagatgcgccaccgtattgagcaattggttggcacc
agccagggcggcatgtggatcgggacttttcatggtttagcgcatcgtctactgcgagcg
catcatttggatgcgaatttgccgcaggattttcagattctggatagcgaagatcagcta
cgactcttaaaacgcctgattaaagccatgaatctggatgagaagcagtggccggcgcgc
caggcgatgtggtacatcaacggcaaaaaggatgaaggcctacggcctaagcatattgaa
agctacgggaatcctattgagcaaacctggctgcgcatttaccaggcttatcaggaagcg
tgcgaccgtgccgggctggtggatttcgctgagctactgctgcgtgcgcacgaactgtgg
ctgaacaaaccgcacatcctcaatcattaccgcgaacgttttaccaatattttagtggac
gaatttcaggatacgaacaatatccagtatgcctggattcgaatgctggcaggggacact
ggtcgggttatcatcgtgggtgatgacgatcagtccatctatggctggcgcggcgcgcaa
gttgaaaatattcagcggtttttgaaagacttctccggcgcacagactattcgtcttgag
caaaactaccgttcgacgaacacgattctgaaagccgccaatgccttaatttcaaataat
aatggtcggctgggcaaagagctctggaccgatggtgccgatggcgaagcaatttcactt
tactgtgcgttcaatgagttggatgaagctcgctttgtggttaaccgcattaaagtgtgg
caggaaaacggcggcgcgctgaatgattgcgccattctgtaccgcagcaacgcccagtca
cgcgtgctggaagaggcgctgctccaggtcagtatgccgtaccgtatttacggcggtatg
cgcttctttgaacggcaggaaattaaggatgcgctggcatatttgcgcctgattgctaac
cggaatgacgatgcggcatttgaacgggtggtgaacacgccaacgcgcggcattggcgat
cgcacgctggacgtggtgcggcaaacctcgcgcgaccgtcagttaacgctgtggcaggcg
acacgggagcttttggttgaaaaagcgctggcaggccgcgccgcttcggcattacaacgg
tttattgagttagttgattctttggcacaggaaaccagcgagttaccgttgcatatacaa
accgatcgggtgattaaggattctggtttgtggttgatgtacgaacaagagaaaggcgag
aagggccaggcgcgtatagaaaacctggaagagctggtgaacgcgacccggcaatatagc
taccaagacgaagatgaagatttgttaccgttgcaggcctttctctctcatgccgcgcta
gaggcgggcgaggggcaggcggataagtggcaggacgcggtacaactgatgaccatgcac
gcggcaaaaggcctcgagtttagccaggttttcattgtgggcatggaagagggcatgttc
cctagccagatggcgttggatgagggcggtcggctggaagaggaacgtcggctggcctac
gttggcgtaacgcgcgccatgatcaagttaacgctaacctacgccgaaacgcggcgcctg
tatggcaaagaagtgtaccatcgtccgtcgcgctttattggcgagctgccggaagagtgt
gtggaagaggtgcgcctccgcgccagcattagccgcccggccaatcatcagcggatgggc
accccggttacgaaaagcgacagcggttttgctcttgggcagcgggtgcgccacgccaaa
tttggcgaagggacgattatcaatctggagggcagtggagaacatagccggttgcaggtg
gcctttcaggggcaggggatcaaatggctggtggcggcctatgcccggctggagagttgt
taa
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