Plasmodium malariae: PMUG01_02013300
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Entry
PMUG01_02013300 CDS
T09444
Name
(RefSeq) chromatin assembly factor 1 protein WD40 domain, putative
KO
K10752
histone-binding protein RBBP4
Organism
pmal
Plasmodium malariae
Pathway
pmal03082
ATP-dependent chromatin remodeling
pmal03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PMUG01_02013300
03083 Polycomb repressive complex
PMUG01_02013300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmal03036
]
PMUG01_02013300
Chromosome and associated proteins [BR:
pmal03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PMUG01_02013300
Histone modification proteins
HAT complexes
HATB complex
PMUG01_02013300
HDAC complexes
Sin3A-HDAC complex
PMUG01_02013300
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PMUG01_02013300
PRC2.2
PMUG01_02013300
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PMUG01_02013300
Heterochromatin formation proteins
Other heterochromatin formation proteins
PMUG01_02013300
Chromatin remodeling factors
NuRD complex
PMUG01_02013300
NuRF complex
PMUG01_02013300
NuRF complex (fruit fly)
PMUG01_02013300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
CAF1C_H4-bd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
MIOS_WD40
WDR54
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_VPS8
WD_LRWD1
Beta-prop_LRRK2
Beta-prop_IFT140_1st
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
39866537
NCBI-ProteinID:
XP_028860146
LinkDB
All DBs
Position
2:172593..173930
Genome browser
AA seq
445 aa
AA seq
DB search
MSTPKESKKRKSNALDEACLELSEEIENGDVHKEEEKEQEDVETQFSNWKTNSGLLYDFV
CRKELEWPSLSIDFGDFHNENIEDNVLNQLVCVGTHTSNKEPNYLYVCDVLFPLEQLAQE
KCIYKINENYEGFDFCCEKKKFTIKSKIAHTGEVNRIKFLPLERKNIVVTKAIDGNLHLF
DINKHKIETNDDKMNPEVSFVGNNSDGFGLDFNAYKKFALTCSNDGMITVYDYNNLSSKT
VNPFYKVQYKSPINDVSSLNDPNLILACADNGYILVYDIRVKTTEPAQQVLGQQVPVNCI
ALNRFTGHFASGSENGKIKIWDIKRFNEPQHIINAHKEAVIRLNFSPNDSSLLASASNNR
FINIYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPITDFNWNHHKKLKMFIGSTGEDNT
LQFWQLKTELLDEVNTIPTSNTDVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccgaaagaaagcaagaaacgcaagtcgaacgcactggacgaagcatgcctg
gagttgagcgaagaaatagagaacggggatgtgcacaaagaggaggagaaagaacaagaa
gatgtagaaacgcagtttagtaactggaaaacaaatagtggtttgttatacgattttgta
tgtagaaaggagttggagtggccatcattatctatcgattttggtgatttccataatgag
aatattgaagataatgtattaaatcagttagtttgtgttggtactcatacatcaaataaa
gaaccaaattatttgtatgtatgtgatgtactatttccattagaacaattagcacaagaa
aagtgcatatataaaattaacgaaaattatgaaggttttgatttttgctgtgagaaaaaa
aaatttactataaaatcgaaaattgcacatacaggggaagtgaatagaataaagttttta
ccattagaaagaaaaaatattgttgtgacaaaagcaattgatggaaatcttcacttattt
gatataaataaacataaaatcgaaacaaatgatgataagatgaatcctgaagtatctttt
gttggtaataactcggatggttttggactagattttaatgcttataaaaaatttgcatta
acttgtagtaatgatggaatgataacagtatatgattataataatttatcttctaaaact
gttaatccattttataaagtacaatacaagtcccctataaatgatgtttcttctcttaat
gatcctaatttaattttagcttgtgcagataatggatatattttagtatacgatattaga
gtaaaaacaacagaacctgctcaacaagtgttaggtcaacaagtacctgttaactgtatt
gctttgaatagatttacaggtcattttgcttcaggtagtgaaaatggaaaaattaaaata
tgggatattaaaagatttaatgaaccacagcatattataaatgcacacaaagaagctgtt
attagattaaatttttcacctaatgattcctctcttcttgcttcggctagtaataatcgt
tttattaacatatacgacttaaacaaaattggggaagaacttgatgctattgatttatcc
gatggaccttctgaactcatcttctctcatggtggacatacacaaccgattacagatttt
aattggaatcatcacaagaaattaaagatgttcataggatccactggggaggataacact
ctccagttttggcagctcaagaccgaattactggacgaggtcaacacgatacccacgtcg
aacacggatgtggagtag
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