Plasmodium malariae: PMUG01_03019600
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Entry
PMUG01_03019600 CDS
T09444
Symbol
RPA1
Name
(RefSeq) replication protein A1, large subunit, putative
KO
K07466
replication factor A1
Organism
pmal
Plasmodium malariae
Pathway
pmal03030
DNA replication
pmal03420
Nucleotide excision repair
pmal03430
Mismatch repair
pmal03440
Homologous recombination
pmal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMUG01_03019600 (RPA1)
03420 Nucleotide excision repair
PMUG01_03019600 (RPA1)
03430 Mismatch repair
PMUG01_03019600 (RPA1)
03440 Homologous recombination
PMUG01_03019600 (RPA1)
03460 Fanconi anemia pathway
PMUG01_03019600 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmal03000
]
PMUG01_03019600 (RPA1)
03032 DNA replication proteins [BR:
pmal03032
]
PMUG01_03019600 (RPA1)
03400 DNA repair and recombination proteins [BR:
pmal03400
]
PMUG01_03019600 (RPA1)
Transcription factors [BR:
pmal03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PMUG01_03019600 (RPA1)
DNA replication proteins [BR:
pmal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PMUG01_03019600 (RPA1)
DNA repair and recombination proteins [BR:
pmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PMUG01_03019600 (RPA1)
MMR (mismatch excision repair)
PMUG01_03019600 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
PMUG01_03019600 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
39866760
NCBI-ProteinID:
XP_028859415
UniProt:
A0A1D3JIC1
LinkDB
All DBs
Position
3:complement(505906..509751)
Genome browser
AA seq
1281 aa
AA seq
DB search
MNRNEEILSKATPNFIYKFFTEPNSEEALSWLNTEIKLICFSQMNAGASQVFLKVIDGTI
PPEYYAIVHLGIEDNNNFSSTISFVKKIIKIENFSITNYYGKLFILAKKVSIFLNIENFD
IEDLFRKYHLQSISYYLLNSQQDNSPRENSTRGDNEYNYDNKYRGGNSNISSNNNNSNNS
NNSNNSNNINNINNINNHSSSSINSSNNNNNHRVTNEFYCENKPRDSEYTRATIDYNNNR
LNIKNFYESNEYYENNMRGNKEKYHHVPNENFVKEPSGPNDNSGYRDNLANRENITHREN
LSYGENQIHGLNPSYRESLKSPNNSRVGDSNINNRNYEEGHMVDLQNRGKFSYNNERTNC
ASYNNYTNYTNCTNYPSNVRDYKSNNEGRSSPQPKHSEYRENGGYNKRNNTINYDRNKYL
SENESYNSNSKSNNNSNSNIINSKSKTHIISRDVVMSSGRNNNYDENIHRNGGAYRGEYN
FEVGVSNSINKNYSDNNSDPRNDNINDYNNDNNNDNNNNDNNNNNNNNDYAKNGIKGLNS
SPHEGKLLEGEKESYIMSNMYGIRRHTDERSHNCRSYNGSNLNNRNYLDDGNYNISSGSI
HGIDIPSGGARNILSGIDHTRDREQEKIKNVGSYRQGKEDIYYNRKKNDHGENSIHADEE
GKMYIGRNAESYNSSAKLSKNEEGINEGYCRRSAEYDSSGNNISNNYGNSYGNNNGNNNG
NNNYGNNKISSKEENLFSSYNQTDEGRKHMRSESVGSLQETKETLNNDIDELSSDRRNEI
KMLKENTLSRKIRKNNPYQSNPSQSNTYQSNNAVIKTNDGILMQINKLSQYSSKWIIKAR
VQSKDNIRKFYSGNKEGKVFNIELCDEDGEIKGNFFGKAVDKWYDFLQVGKIYKISKGNI
KAANKKFNTLKHDCEITLDENSIIELLEENDFNIPKFIYNFTYIDNIKNMNTGSLVDVIG
IVFNFQETMQILIKKTGQYKEKRDLILIDDSNDTINVTLWGDHALKIEEMDLKDNCIVCF
KYLKVGEWKGKKLESHIKTKIEINPEIDRAYILKNWWINNKKNMHALVNLNSNNFNIELQ
KTIEEIKKDVNVANEDALSGKGIIFTTFGFIDHIYNTIPVYSACPDCNKKMITNNIADEE
IETSQLLDESMYCAKCNKNNIPIYNYSINLKITDSTDSLRASAFSNCAKTIMNGLSADEF
MKLRQEYVTQENIENFDLIEKVKLKEFFFRIKAYMTSHMDELKKNYTIIEIIPLSKLLLD
NCRYLVKSIRTLTEKRELENE
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaacgaagagattttaagtaaggctacgcctaactttatatataaatttttt
accgaaccaaattcagaagaagcgttaagttggttgaacactgaaataaagttgatttgt
tttagtcaaatgaatgcaggggcgagtcaagtttttttaaaagttattgatggaacaata
ccacctgagtattatgctattgtacatttaggcatagaggacaataacaactttagttct
actatatcgttcgtaaaaaaaataattaaaattgaaaatttttctattacgaattattat
ggaaaacttttcattctagcgaaaaaggttagtatctttttaaatatagaaaattttgat
attgaagatttatttagaaaatatcacttacaaagtatatcttattatctgttaaattca
caacaggataatagtccaagggaaaattccactcgtggggataacgaatataattatgac
aacaaatacagaggtggtaatagtaatattagtagtaataataataatagtaataacagt
aataacagtaataacagtaataacattaataacattaataacattaataaccatagtagt
agtagtattaatagcagtaataataataataaccatagagttactaacgaattttattgt
gaaaataaacccagagatagtgaatatacacgcgctacgatcgattacaataataataga
cttaatattaaaaatttttatgaatcaaatgaatattatgaaaataatatgcggggtaac
aaggaaaagtaccatcatgtacccaacgaaaattttgtgaaagaaccgagtggtccgaat
gataattcgggttatagggacaatttagcaaatagagaaaatatcacccatagggaaaat
ttatcgtatggggaaaatcaaatccatggtttgaatcccagttatcgtgaaagtttgaaa
agcccaaataacagcagagttggggatagcaatataaataatagaaattatgaagaaggt
catatggtggatttacagaatagaggaaagttttcatataataatgaaagaactaattgt
gcaagttataacaattacacgaattacacaaattgcactaattacccatccaatgtaagg
gattataagagtaataatgaggggagaagctcacctcaaccaaagcacagtgaatataga
gagaatggaggttataacaaaaggaataacacaattaattatgacagaaacaaatattta
tccgagaatgaatcttacaatagtaacagtaaaagtaataataatagcaacagtaatatt
attaacagtaagagcaaaacacacattataagcagagacgttgttatgagcagtgggagg
aacaacaactacgacgaaaatattcataggaacggtggtgcatacagaggggaatataat
ttcgaggttggagtaagtaacagtattaataaaaattatagtgataataacagtgatcct
cgtaatgataatattaatgattataataatgataataataatgataataataataatgat
aataataataataataataataatgactatgcaaaaaatggaatcaagggtttaaattct
tccccacacgagggaaaattgcttgaaggagagaaggaatcatatattatgagcaacatg
tatgggattagaagacacaccgatgaaagaagtcataactgcagaagctacaacggaagt
aacctcaacaacagaaactatcttgatgatggaaactataacattagtagtggaagtatt
cacggtattgatatcccgagcggtggtgcaagaaacatcctaagtggtattgatcatacc
cgagatagggagcaggaaaagatcaaaaatgtgggtagctatagacaaggaaaagaagac
atctactataataggaagaaaaatgatcatggtgaaaatagcattcatgctgatgaagaa
gggaaaatgtatatagggaggaacgctgaaagttacaacagtagtgcgaaactaagtaaa
aatgaggaaggtataaatgaagggtattgtcgtcgctctgcggaatacgatagtagtggt
aacaatattagtaataattatggtaacagttatggcaataataatggcaataataatggc
aataataattatggtaataataaaattagtagtaaagaagagaatctgttttccagctac
aatcaaacagatgagggaaggaaacacatgagaagcgaaagcgttgggagcttgcaagaa
acaaaggaaacgctaaacaatgatatagatgagttatcatcagacagaagaaatgaaata
aaaatgttaaaagagaatacattaagtaggaaaattaggaaaaacaatccttatcagagt
aacccttctcagagtaacacatatcagagtaataatgccgtgataaaaacaaatgatgga
atattaatgcaaataaataagctatctcaatactcttcaaaatggattatcaaagctagg
gttcagtccaaagataatattagaaaattttactcaggtaataaagaaggaaaagtattt
aatatagaattatgtgatgaagatggtgagataaaagggaatttttttggtaaggcagtt
gataaatggtatgattttttacaagtaggaaaaatatataaaataagtaaaggaaatata
aaagcagcaaataagaaatttaatactttaaaacatgattgtgaaattaccttagatgaa
aattctattatagaattattagaagaaaatgattttaatattccaaaatttatttataat
tttacttatatagataatattaaaaatatgaatacaggttctttagtagatgtaattgga
attgtattcaattttcaagagactatgcaaattttgattaaaaaaacaggacagtataaa
gaaaaaagggatttaatattaatagatgatagtaatgatactattaatgtaaccttatgg
ggtgaccatgctctaaaaatagaagaaatggatttaaaggataactgtattgtctgtttt
aagtatttaaaagttggggaatggaaaggcaaaaaattagaatctcatatcaaaacaaaa
attgaaataaatccagaaattgatagagcttatattttaaaaaattggtggatcaataat
aaaaaaaatatgcatgctttagttaatttaaatagtaataatttcaatatagaattacaa
aaaactattgaagaaattaaaaaagatgtcaacgtagcaaatgaagatgctctatcagga
aaaggaattatttttacaacttttggatttatagatcatatatataatactatacctgta
tattccgcttgtcctgattgtaataagaaaatgattactaataatatagccgatgaagag
atagaaacatctcaacttttggatgaatcaatgtattgtgccaagtgtaataaaaataat
attcctatttataattattctattaatttaaaaattactgatagcactgattcgttaaga
gcttctgccttttccaattgtgcaaaaacaattatgaacggcctatccgctgatgagttt
atgaaactaagacaagaatatgttacacaagaaaatattgaaaattttgatttaattgaa
aaagtcaaactaaaagaattcttttttcgaattaaagcctatatgacatctcacatggat
gagctaaaaaagaactacactataattgaaataattcccctcagcaaattgctgcttgac
aactgcaggtatttggttaagtccattaggacccttacagagaagagggaattagaaaac
gagtga
DBGET
integrated database retrieval system
