Plasmodium malariae: PMUG01_03026400
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Entry
PMUG01_03026400 CDS
T09444
Symbol
CSL4
Name
(RefSeq) exosome complex component CSL4, putative
KO
K07573
exosome complex component CSL4
Organism
pmal
Plasmodium malariae
Pathway
pmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMUG01_03026400 (CSL4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_03026400 (CSL4)
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PMUG01_03026400 (CSL4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PMUG01_03026400 (CSL4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
Dicty_REP
BURP
ECR1_N_2
DUF7093
Motif
Other DBs
NCBI-GeneID:
39866828
NCBI-ProteinID:
XP_028859478
UniProt:
A0A1D3JIM1
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Position
3:842068..843193
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AA seq
269 aa
AA seq
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MDDTIVLPGEVIGSSLDYICGENTYVLNNEIRSAILGKKSITTLAATTTTTATTATTATT
ATTATTAATTTAATTTAATTTAATTTAATTTATTTAATTTAATTTTATTATATTATTTTD
DNNGEHKKVISVDNVKHFVALPKVGDVVICKIYRVTFNIIYCHIILSNNKPLKNSFKGYI
NKSDIHIYEGELGDNFDCFKQGDIIKAKVLSIGQHSSYKLCTVGSDLGVIIALSDKGDIL
KPVAWNLMINVNDMSFEQRKVSNDFSVPI
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaccatagtattaccaggtgaagtaataggcagctctttggactatatatgt
ggtgagaacacctatgtgttgaataatgaaataaggtcagctatattgggtaaaaaaagt
attactactcttgctgctactactactactactgctactactgctactactgctactact
gctactactgctactactgctgctactactactgctgctactactactgctgctactact
actgctgctactactactgctgctactactactgctactactactgctgctactactact
gctgctactactactactgctactactgctactgctactactgctactactactactgat
gataataatggtgaacataaaaaggtaattagtgtcgacaatgtaaaacattttgtcgct
cttccaaaagtaggggatgttgtaatatgtaaaatttatagagtaacgtttaatataata
tattgtcatattatactgtcaaataataaacctttgaaaaattcatttaaagggtatata
aacaaaagtgatatacatatatatgaaggagagcttggtgataactttgactgctttaaa
caaggggatattataaaagctaaggttttgtcaatcggtcagcattcttcctataaatta
tgtacagttggatcagatttgggtgttataatagctttaagtgacaaaggtgatatatta
aaacccgtggcatggaacttgatgatcaatgtgaatgacatgagttttgaacaaaggaaa
gtgtcgaacgatttttctgttcccatataa
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