KEGG   Plasmodium malariae: PMUG01_03026400
Entry
PMUG01_03026400   CDS       T09444                                 
Symbol
CSL4
Name
(RefSeq) exosome complex component CSL4, putative
  KO
K07573  exosome complex component CSL4
Organism
pmal  Plasmodium malariae
Pathway
pmal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PMUG01_03026400 (CSL4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmal03019]
    PMUG01_03026400 (CSL4)
Messenger RNA biogenesis [BR:pmal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PMUG01_03026400 (CSL4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     PMUG01_03026400 (CSL4)
SSDB
Motif
Pfam: ECR1_N EXOSC1 Dicty_REP BURP ECR1_N_2 DUF7093
Other DBs
NCBI-GeneID: 39866828
NCBI-ProteinID: XP_028859478
UniProt: A0A1D3JIM1
LinkDB
Position
3:842068..843193
AA seq 269 aa
MDDTIVLPGEVIGSSLDYICGENTYVLNNEIRSAILGKKSITTLAATTTTTATTATTATT
ATTATTAATTTAATTTAATTTAATTTAATTTATTTAATTTAATTTTATTATATTATTTTD
DNNGEHKKVISVDNVKHFVALPKVGDVVICKIYRVTFNIIYCHIILSNNKPLKNSFKGYI
NKSDIHIYEGELGDNFDCFKQGDIIKAKVLSIGQHSSYKLCTVGSDLGVIIALSDKGDIL
KPVAWNLMINVNDMSFEQRKVSNDFSVPI
NT seq 810 nt   +upstreamnt  +downstreamnt
atggatgacaccatagtattaccaggtgaagtaataggcagctctttggactatatatgt
ggtgagaacacctatgtgttgaataatgaaataaggtcagctatattgggtaaaaaaagt
attactactcttgctgctactactactactactgctactactgctactactgctactact
gctactactgctactactgctgctactactactgctgctactactactgctgctactact
actgctgctactactactgctgctactactactgctactactactgctgctactactact
gctgctactactactactgctactactgctactgctactactgctactactactactgat
gataataatggtgaacataaaaaggtaattagtgtcgacaatgtaaaacattttgtcgct
cttccaaaagtaggggatgttgtaatatgtaaaatttatagagtaacgtttaatataata
tattgtcatattatactgtcaaataataaacctttgaaaaattcatttaaagggtatata
aacaaaagtgatatacatatatatgaaggagagcttggtgataactttgactgctttaaa
caaggggatattataaaagctaaggttttgtcaatcggtcagcattcttcctataaatta
tgtacagttggatcagatttgggtgttataatagctttaagtgacaaaggtgatatatta
aaacccgtggcatggaacttgatgatcaatgtgaatgacatgagttttgaacaaaggaaa
gtgtcgaacgatttttctgttcccatataa

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