Plasmodium malariae: PMUG01_04012800
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Entry
PMUG01_04012800 CDS
T09444
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pmal
Plasmodium malariae
Pathway
pmal03030
DNA replication
pmal03410
Base excision repair
pmal03420
Nucleotide excision repair
pmal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMUG01_04012800 (RFC1)
03410 Base excision repair
PMUG01_04012800 (RFC1)
03420 Nucleotide excision repair
PMUG01_04012800 (RFC1)
03430 Mismatch repair
PMUG01_04012800 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmal03032
]
PMUG01_04012800 (RFC1)
03400 DNA repair and recombination proteins [BR:
pmal03400
]
PMUG01_04012800 (RFC1)
DNA replication proteins [BR:
pmal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PMUG01_04012800 (RFC1)
DNA repair and recombination proteins [BR:
pmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PMUG01_04012800 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_30
Rad17
AAA_assoc_2
AAA_14
BRCT_2
DNAX_ATPase_lid
AAA_22
AAA_19
AAA_16
Sigma54_activ_2
AAA_5
Gp44_lid
RuvB_N
PTCB-BRCT
AAA_18
Motif
Other DBs
NCBI-GeneID:
39866959
NCBI-ProteinID:
XP_028859586
UniProt:
A0A1D3JJ80
LinkDB
All DBs
Position
4:214708..217692
Genome browser
AA seq
994 aa
AA seq
DB search
MCSKGKNLFDKDSDDDIGRKRKRLKKVSSNLFDNEEDDDDDFFDNEGKDKSLSKSVVEIN
DDDEVEEGNKNILEKKSLNKKASNKPVYYDITSYFKPSSKKIDVNSNNNSNNNNNNNSNN
SNSNNSNSNNSNRNNSNSNNSNSNNRNSNNRNSNNSNSNNRNNNYSSNRNNSVMIKSSSN
NSSKIPVKNVSEYFDLLEKDQKNVKGENAKPNLKRERGQEGEQDVDIIEEERYKKKLTSF
GKNKTKMENNDTTQKFDYLPFNNLKFVLTGVFKNFSRDDLQSKIKEHGGSVMSAVSSKTH
YLIHGEYLEDGRLYNEGRKYLKAFELQQKSNSIIKILNEEQLLELLPEGKSHPQYEEQYG
THNGDANKENSDKSEYQDFVKKQQSDYSTNYKSASDNYSSSNMLDKESRKDKHDNGLGNY
NNEVDERNKLSNNKVLNQLWVEKYRPKNINELVGNNQNVLKLKNWLASWEDVCIRGMKKQ
VTKTFRGIYENVNARCALLSGAAGIGKTTTAKIISEASGYNVIEFNASDERNKAAIEKIS
EMATGGYSIASLKSRKLSKTCIIMDEVDGMSSGDKGGSAAILKLIEKTKCPIICICNDRQ
NSKMRTLANKCYDLKFTVPNKNAVVKRLLEICKKENIMMEPNALELLWETTVGDMRQMLN
TLQLLSKTYKRIQFLDLKKELNNSNKNVQSLANPFEITLKLLNFHESSKLKVREIMDLFF
VDYELIPYFISENYTNVFNDNDKSPNSINKWNAFAQISYDLALADKIKYNMKTTMDFSLL
PHFSILSCVCPVMRIKLLKLFMSGRINFPSAFGKISTFNKNKRLLNELCFNISYKLNVCP
KYMVTSGFLSYIYFKIMTPLLKNNINEAIELMEEYNITREMITEILPSLRLPNQENLYDK
LDSKVKASFTRLYNSSHVIKNDPNSLRKGLTSTEKKSTFKINEYESDEDMDELSESKEDK
DDDILVKSKIDRKPTIKNRSAAKPKAPSKNIKKR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaaaaggaaaaaatttatttgataaggacagtgatgatgatatcggaaggaag
aggaagcgcttgaaaaaggtttcaagtaatttatttgataacgaagaggatgatgacgat
gatttttttgataatgaaggaaaagataaatctctaagcaaaagtgttgttgaaattaat
gatgatgatgaggtggaggaaggtaataaaaatatactagagaaaaaatcgcttaataaa
aaggcatcgaacaaacctgtatattatgatattacttcatattttaaacctagctctaaa
aaaatagatgttaatagtaataataatagtaataataataataataataatagtaacaat
agtaatagtaacaatagtaatagtaacaatagtaatagaaacaatagtaatagtaacaat
agtaatagtaacaataggaatagtaacaataggaatagtaacaatagtaatagtaacaat
aggaacaataattatagtagtaatcgtaataacagtgtaatgataaaaagcagctcaaat
aatagcagtaaaattcctgtgaaaaatgtgagtgaatattttgatttattagaaaaagac
caaaaaaatgtaaaaggagaaaatgcaaagcctaacctaaaaagagaaagaggacaagaa
ggagaacaagatgttgatattattgaggaagaaagatataaaaaaaaactcacttctttt
ggaaaaaataaaacaaagatggaaaataatgacacaacacaaaagtttgactatttacca
ttcaataatctaaaatttgtactaacaggagtattcaagaatttttcaagagatgattta
caatcaaagattaaagaacatggtggtagtgtaatgtcagctgtgtcatcaaaaactcat
tatttaattcatggtgaatatttggaagatggaagactatacaatgaagggaggaaatat
ttaaaagcatttgaattacaacaaaaaagtaattctatcattaaaatattaaatgaggaa
cagcttttggaattactcccagaagggaaaagtcatccacaatatgaagagcagtatggt
acacacaatggtgatgcaaataaggaaaattcagataaatcagaatatcaagattttgta
aaaaaacaacagagcgattattcaacaaattataaaagcgctagtgacaactacagtagc
agcaacatgctcgataaggaaagtagaaaagacaaacatgataatggcctaggaaactac
aacaatgaagtggatgaaaggaataaattaagcaataacaaagtgctcaatcaactttgg
gttgaaaaatatagacccaaaaatattaatgaattagttggtaataatcaaaatgttcta
aaattaaaaaattggctagccagttgggaagatgtatgtataaggggaatgaaaaaacaa
gtaactaaaacatttcgaggtatctatgaaaatgtaaatgcacgttgtgctttactaagt
ggtgctgcaggtattggaaaaacaacgactgcaaagattatatcagaagcttcaggatac
aatgtaatcgaatttaatgcttcagatgaacgaaataaagcagcaattgaaaaaattagt
gaaatggcaactggaggatattctatagcttcgttaaaaagtcgtaagttatcaaaaact
tgtattataatggacgaagtagatggtatgtcaagtggtgataaaggtgggagtgcagca
attttaaaattaatagaaaaaacaaaatgtcctattatatgtatatgtaatgataggcaa
aatagtaaaatgagaacattagctaataaatgttatgatttaaaatttactgtaccaaat
aaaaatgctgttgttaaaagacttttagaaatatgtaagaaagaaaatattatgatggaa
cctaatgccttggaattattatgggaaactaccgtaggagatatgagacaaatgttaaac
acactgcaactgttatcaaaaacatataagaggatacaatttttagatttaaaaaaagaa
ttaaataattctaataaaaatgtacagtctttagctaacccttttgaaataactctcaaa
cttttaaattttcatgaatcatcaaaacttaaggtaagagaaattatggatctatttttt
gtcgattatgagttaattccttattttataagtgaaaattatacaaatgtttttaatgat
aatgataaatcacctaactcaataaataaatggaatgcttttgctcaaatatcatatgat
ttagcactagctgacaaaataaaatataatatgaaaacaactatggacttttctttatta
ccacatttttctattttatcttgtgtgtgtccagttatgcgcattaaattactcaaatta
tttatgtcaggaagaattaattttccttcagcttttggaaaaatttctacatttaataaa
aataaaagattattaaatgagttatgttttaatatatcctataaacttaatgtatgtcct
aaatatatggtaacttctggatttttaagttatatttattttaaaattatgacaccttta
cttaaaaataatataaatgaagccattgagttaatggaagaatataatattactagagaa
atgattactgaaattttaccatctctaagattacctaatcaggaaaatttatatgataaa
cttgattcaaaagtaaaagcttcgtttactcgtttatataactcctcgcatgttatcaaa
aacgatcctaactcattaaggaaaggactcacatcgactgaaaaaaaaagcacatttaaa
attaacgagtatgaatctgatgaagacatggacgaactaagcgaatcaaaagaagataaa
gatgacgacattttggtaaaaagtaaaattgaccgaaaaccgactatcaagaataggtca
gctgcaaaacccaaggccccgagcaagaacatcaagaagaggtga
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integrated database retrieval system
