Plasmodium malariae: PMUG01_04016700
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Entry
PMUG01_04016700 CDS
T09444
Symbol
RPB2
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2, putative
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmal
Plasmodium malariae
Pathway
pmal03020
RNA polymerase
pmal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMUG01_04016700 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
PMUG01_04016700 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmal03021
]
PMUG01_04016700 (RPB2)
03400 DNA repair and recombination proteins [BR:
pmal03400
]
PMUG01_04016700 (RPB2)
Enzymes [BR:
pmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMUG01_04016700 (RPB2)
Transcription machinery [BR:
pmal03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PMUG01_04016700 (RPB2)
DNA repair and recombination proteins [BR:
pmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PMUG01_04016700 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
39866996
NCBI-ProteinID:
XP_028859622
UniProt:
A0A1D3JJ98
LinkDB
All DBs
Position
4:complement(370426..374660)
Genome browser
AA seq
1352 aa
AA seq
DB search
MAVKIESSYILKEFVSPEAPKEEEESDEEQITEEDSWVVIGSFFGSHGLVNQQIESYNDF
IEYRMQEIIDEHPQIEIRPQPQYRSDKEENNNIIYSLKFGQLSLDRPFYDERNMINKNLW
PQEARLRNLTYSSAIYIDIEQNTYIIDEVTKKQILKEKFIYERINLGRIPLMLKSMFCWT
KGLPENEIADMGECAFDQGGYFIVNGGEKVLVAQERMANNFIYVFKKKQPSKFGWIAEIR
SQMEKSQATSAFSVKMKTKGGTGVGVSRGSSNSSSSKAGGQLVATLPYIRTEISVGILFR
ALGCTSDRDILQRIVYDFNDKLMINTLRETLEECIDYPTQDICLDFIGKRGPTVGASREK
RILYAKELLRKEVLPHMGTGPGVESKKSYFIGYMINRLLLAELGRIKEDDRDHFGKKRLD
IAGPLMASSFSTYFRKMAKDVRRVLQRQIDNNKPFDVAGAIRSCSQITQGMQYQLATGNW
GKDKDGKVIRTGVAQVLNRLTYSSCLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPFE
TPEGQSVGLVKNLSLMCDISVGTSTNNIYEFLLEWGLESLDEVPPQLMKEKVKLFLNGKW
VGCFNQIDNLIETLYELRRRCDISPEASIVRDVNSKEIKIFTDSGRAMRPLYVVKNVNGE
NRLKLTKEHVRNISKHPDTYNWDYLIQEGIIEYIDCEEEETTMISMFIDDLKTGTGYYNN
YTHCEIHPSLILGVCASIIPFSDHNQSPRNTYQSAMGKQAMGIYVTNFNIRLDTLAHLLY
YPQRPLVCTKVMEYLRFRDLPAGINAIVAIMCYTGYNQEDSLIMNQSSIDRGLFRSVFYR
SYTSEEKQQGSLIIESFEKPSIRVVKNLKRADYTKLDDDGLIAPGIRVLGDDVIIGKVSP
NIEDEDDIVIQRKVPTTQVYSSTGAISSSSLTSSSALSSSAAASSGGGHTSSSLSSSLLT
RGNVDSPYASPIISSNVLDSPPDSPVSDKYSIDGGSGGGVVGAPSIISASPSSTTYYSTT
AGGGDTYYASTNNAKYGTTAISTTTKDDTELPTLTISTSNILKQYKKDCSLSLRANENGV
VDTVMLSSNSRGNKFAKVKVRSVRIPQIGDKFASRHGQKGTIGITYRIEDMPFSSDGTYP
DIIMNPHAVPSRMTIGHLVECLSGKVAAIEGSEGDATPFSKITVQEISNKLHKLGYEKYG
NDILYNGHNGKMLKSKIFIGPTYYQRLKHMVEDKIHARSRGPLTMITRQPTEGRSRDGGL
RFGEMERDCMISHGSAKMLKERLFEESDAYRVHVCDNCGLCCIADINKNAYECTVCNSKT
NISQIYIPYACKLLFQELMTMAIYPKLVLEDM
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaagattgaatcatcttatatcctcaaggagtttgtgagtccagaggccccc
aaggaagaggaagaaagcgatgaggagcagataacggaggaggacagctgggttgtaata
gggtcgttttttggtagtcatggattggtgaaccagcagatagagagttataacgacttt
atagaatataggatgcaagaaattatagatgaacatccacagattgaaataagaccacaa
ccacaatacagatcagataaagaagaaaataataatataatatattctttaaaatttgga
cagttatctttagatagaccattttatgatgaaaggaatatgataaataaaaatttatgg
cctcaagaagcacggttacgtaatttaacatactcatcagctatatatatagacatagaa
cagaacacatatataatagatgaagtaacaaagaagcaaatattaaaagaaaaatttata
tatgagaggataaatttagggagaataccgttaatgttaaaatcaatgttctgttggacc
aaaggattaccagaaaatgaaattgcagatatgggggaatgtgcatttgatcaaggtggt
tacttcattgttaacggaggagaaaaggtattagtagcacaagaacgaatggctaataat
tttatttatgtatttaaaaaaaagcaaccatcgaaatttggatggatagcagaaattaga
tcacagatggaaaagtctcaagcgacttctgcattttctgtaaaaatgaaaaccaaagga
ggaacaggagtaggtgtatctcggggtagtagtaatagtagttcgtccaaagcaggtgga
caattagtagcaacattaccatatataaggaccgaaatatctgttggtatattatttcga
gcgttaggatgtacctcagatagagatatattacaaagaattgtatatgattttaatgac
aagttgatgataaatactttaagagaaacattagaagaatgtattgattatcctacacaa
gatatttgtttagattttattgggaagagaggacctactgttggtgcttctagagaaaag
agaattttatatgcaaaggaattgctacgtaaagaggtattaccacatatgggtacaggt
ccaggggtagaaagtaaaaaatcatattttatcggttatatgataaatagattattatta
gcagagttaggacgaattaaagaagatgatagagatcattttgggaaaaaaagattagat
atagctggaccattgatggcaagtagcttttcaacgtactttaggaaaatggcaaaagat
gtaagaagagtattacaaagacaaatagataacaataaaccatttgatgtagctggtgct
attaggagttgttcacaaattactcaaggaatgcagtatcaattagctacaggtaactgg
ggaaaggataaagatggaaaagtaatcagaacaggtgtagcacaagtattaaaccggtta
acctattcttcttgtttgtcccatttgagaagattgaacacccctttgggtagagaaggg
aagatggctaaaccaaggcaattacataatacacattggggtatgatatgtccatttgaa
acaccagaaggacaatccgttggtcttgttaaaaatttatctttaatgtgtgatataagt
gttggtacctctactaataatatatatgagtttttattagaatggggtttagaatcctta
gatgaagtgcctcctcaattaatgaaggaaaaagtaaaattgtttctaaatggaaaatgg
gtaggatgttttaatcaaattgacaatttaattgaaacattgtatgagttaagaagacga
tgtgatatatcacctgaagcatctattgttagagatgtaaacagtaaagaaattaaaatt
tttaccgattcgggtagggcaatgagaccattatatgttgttaagaatgtgaatggtgaa
aatagattgaaattaactaaggagcatgttagaaacatatctaaacatccagatacgtat
aattgggattatttaatacaagaaggcattatagaatatattgactgtgaagaagaagag
acgactatgatcagtatgtttattgatgatttaaagacaggtacaggatattataataat
tatactcattgtgaaatacatccatccttaatactaggcgtctgtgcttctattatacca
tttagtgatcataatcaaagccctcgtaatacatatcaaagtgcaatgggtaaacaagct
atgggtatatatgttacaaattttaatatacgattagatacattagctcatttgttatac
tatccacaaagaccattagtatgtaccaaggtaatggagtacttacgattccgggattta
cctgcaggaattaatgctattgttgcaattatgtgttatactggatataatcaagaagac
agtttaattatgaaccagtcatctattgatagaggtttgttcaggagcgtattctatcgt
agttacaccagtgaagagaaacaacaaggtagtttaattattgagtcgtttgaaaaaccg
tccatcagagttgttaaaaatttaaaaagagcagactatacaaagttagatgatgatgga
ctaatagctccaggaattagggttttaggagatgatgtaataataggaaaggtatcaccg
aacatcgaggatgaagatgatatagtcatacaaagaaaggtgcctacaacacaggtttat
agtagcacaggtgctatctcttcttcttctttgacttcatcttctgcattatcttcttct
gctgctgctagtagtggtggtggtcatacatcctcttcattgagtagttctttgttaaca
cgtggaaatgttgatagcccgtatgcttctcctataatttcatcaaacgttctggacagt
cctccagattcacctgttagtgataagtatagtattgatggtggtagcggtggcggtgtt
gttggtgcaccaagtattatatctgctagtccatccagtacaacatattatagtactaca
gctggtggaggagatacgtactatgcaagtacaaataatgcaaaatatggaacaacagct
attagtaccactacaaaagatgatacagaattaccaacgttaacaattagtacctcaaat
atattaaaacaatataaaaaagattgttctttaagtttacgagcaaatgaaaatggagta
gttgacacagttatgttatcatcaaatagtagaggaaacaaatttgctaaggtaaaagta
cgttctgtccgtatcccacagataggtgataaatttgcaagtagacatggacaaaagggt
acaataggaattacatatagaattgaagatatgccatttagttcagatggtacatatcca
gatataattatgaatccacatgctgttccatctcgtatgactattgggcatttagtagaa
tgtttgtcaggaaaagtggcagcaatagaaggaagtgaaggggatgcaacaccattttct
aaaataacagttcaagaaatttcaaataaattgcataaattaggatatgagaaatatgga
aatgatatattatataatggacataatgggaaaatgttaaaatcaaaaatttttattggt
ccgacttattatcaaaggttaaaacatatggttgaagataaaatacatgctagaagtaga
ggacctttaactatgattacacgtcaaccaacagaaggaagatcaagagatggtggtcta
cgttttggtgaaatggaaagagattgtatgatttcacatggttcagcaaaaatgctcaaa
gaaagattatttgaagaaagtgatgcttatcgtgtacatgtttgtgataactgtggttta
tgttgtattgctgacattaacaaaaatgcctacgaatgtactgtgtgtaatagcaaaacg
aacatttcccagatttacattccctatgcatgcaaattgttgtttcaggaacttatgacc
atggctatataccccaagcttgtgctcgaggacatgtga
DBGET
integrated database retrieval system
