Plasmodium malariae: PMUG01_05024800
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Entry
PMUG01_05024800 CDS
T09444
Name
(RefSeq) ATP-dependent RNA helicase prh1, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmal
Plasmodium malariae
Pathway
pmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMUG01_05024800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmal03019
]
PMUG01_05024800
03012 Translation factors [BR:
pmal03012
]
PMUG01_05024800
Enzymes [BR:
pmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PMUG01_05024800
Messenger RNA biogenesis [BR:
pmal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PMUG01_05024800
Translation factors [BR:
pmal03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PMUG01_05024800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
nSTAND3
AAA_11
AAA_14
AAA_22
Sigma54_activat
TsaE
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
39867290
NCBI-ProteinID:
XP_028860394
UniProt:
A0A1D3JLB4
LinkDB
All DBs
Position
5:771079..774390
Genome browser
AA seq
880 aa
AA seq
DB search
MSELPILKYKNEIKKVLKKNKLIIIKGETGCGKTTQVPQIINEKFFDKEGKRKKKKKNPN
NNKENKSINEKDGSITNKSGYNKRKKKKMLISLPRRVATITVAERVSKEMNRGDIGSYVG
YAIRFKNVCSKETRIKFVTDGILIREIMNDPLLKKYKFIILDEIHERSIRTDVLLGYTKI
LLEKRKKLKIILMSATFDINTFNTFFDNPPIISIPHKIHKITIFYPKKCIEDYLLSIVCT
ILQIHFGNAHIKHEGNTYYTEVENCENEMLVNQSVQDKYVKSNEQNNIITKGYANMDIVD
CEYKKLNFNKDIDKKNCIGDILVFLPGQEEIEMVNIMLKEKLKIIYKGALLKKLINTENK
NQDNNDVLSKINSTFNSESQTVDDICFHFGNTEVIPDKIYTMKILQLYSSLPNKKQRIIF
DPVPPNTRKVILSTNVAETSVTIPNIKYVIDSGKVKIKFFDAKKGSSVLKITQISKDSAI
QRSGRAGREAPGQVYRMYTKEEYENMNPFLIPEIFRTDLTQIYLELKAMNINNPLEFNFP
ENPKKEFLLQSAKMLLKINAIDVDNNLTELGKKLCLLPLSPIYANILLCSIEFNCIDEIA
TIVALLNCDSIFLNYNFYEDLNAINEEILSSNKDGRREARNNNKKKRKKKKNDDVDDEDN
DEEHKKNIENGKKKKRENSDFVKEKKGNFEDENDDRIDTNIDELKIRDKNKLINAARRKL
IHPDGDHLTLLHIFYLWQEEESVNQKKYFCHLYALNNEILQQVEKIKIQLLEIIKNKLGV
EIPKKLHMHKWEQVLICLCKSCFFHVARSTSNTNVFINLVNKSKIRIHPSSTLFNSIIKP
SFIVYSDIVQTKRLYARIVTRIEADWLLKHVSKNFQLMKT
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgccaattttgaaatacaaaaatgaaataaagaaagtgttgaagaaaaat
aaactgattattataaaaggtgaaacaggatgcggaaaaactactcaagtgccgcaaata
ataaatgagaaattttttgataaagaggggaaaaggaaaaaaaaaaaaaaaaatccaaat
aacaataaagaaaataaaagtatcaatgaaaaagatgggagcattactaacaaaagcgga
tataataaaaggaagaaaaaaaaaatgcttatatcactaccaagaagagtagctactatc
acagtggcagaaagagtatcaaaggaaatgaatagaggagatattggaagttacgtaggt
tatgcaattagatttaaaaatgtgtgttcaaaagaaacaagaataaaatttgttacagat
ggaattttgattagggaaattatgaatgaccctttattgaaaaaatataaatttataata
ttagatgaaatacatgaaaggtctatcagaactgacgttttgttgggttacacaaaaata
ttattagagaaaagaaaaaaattaaaaattattctcatgtcagctacttttgatattaac
acttttaacaccttttttgataaccctcctattatttctattccccacaaaattcataaa
attaccattttttatccaaaaaaatgcattgaagattatcttctttcaattgtgtgcaca
atactgcaaattcattttggaaatgcgcatattaaacatgaaggaaatacatactacacg
gaagttgaaaattgtgaaaacgaaatgttggtcaatcagtcagttcaagacaagtatgta
aaatcaaatgagcaaaataatattatcacaaaaggttatgccaatatggacattgtagac
tgtgaatataaaaaactaaattttaataaagatatagacaaaaaaaattgcataggtgat
attctagtttttttgcctggtcaggaagaaatagaaatggtaaatattatgctaaaagaa
aaattgaaaataatctacaaaggagcattactcaagaagctaattaatactgaaaataaa
aatcaagataataatgatgttttaagtaaaataaatagcactttcaattcagaaagccaa
acggttgatgatatttgttttcattttggaaatacagaagtaattccagataaaatatat
acaatgaaaattctgcagctatattcatctcttcccaataaaaaacagagaatcatattt
gacccagtcccaccaaacacgagaaaggtcattttaagcacaaacgttgcggaaacgtca
gttaccattccaaatataaagtatgttatagacagcggaaaggtaaaaataaaatttttc
gacgctaaaaagggaagtagcgttctgaaaataactcaaatttcaaaagactcagctatt
caacgaagcggaagagctgggagggaggcccccggacaggtttatagaatgtacacaaag
gaggaatatgaaaacatgaacccctttttaattccggaaatttttcgcacagatcttacg
cagatctacttggaattaaaagcaatgaatattaataacccactggaatttaattttccc
gaaaacccgaagaaggaatttcttctccagtcagcaaagatgttattaaaaataaatgca
attgatgtagataataatttaaccgagttaggaaaaaaattgtgcctactcccactaagt
cctatatatgcgaatatattattatgctctattgaatttaattgtattgatgaaattgca
accattgtagctttattaaactgtgatagcatttttttaaattataatttttatgaagat
ttaaatgcaattaatgaagaaatattaagcagtaacaaagacggaaggagggaagcgaga
aataataacaagaaaaaaagaaaaaaaaaaaaaaatgatgatgttgatgatgaggataat
gatgaagaacacaaaaagaatatagaaaatggaaaaaagaaaaaaagagaaaattcggat
tttgtaaaagaaaaaaaaggcaattttgaagatgaaaatgacgaccgaattgacactaat
attgacgaattaaaaataagagataaaaacaaactaataaatgctgctaggagaaaactt
attcatcctgatggggatcatttaaccctattacatattttttatttatggcaagaagaa
gaatcggttaatcaaaaaaaatatttttgccatctttatgcattaaataatgaaatatta
caacaagtagaaaaaataaaaatacaattattagaaattataaagaataaattgggggta
gaaattccaaaaaaattgcatatgcataaatgggaacaggttttaatatgcttgtgcaaa
tcttgttttttccatgtagctagatcgacatcgaacacaaatgtttttataaatttagta
aacaaaagtaaaatacgcatacatccgtcatctactctttttaactctattattaaacct
tcttttattgtatattcggatattgtccaaaccaaaaggttatatgctcgtattgtgaca
aggattgaggcagactggttgctcaagcacgtatctaaaaattttcaactgatgaaaacg
tag
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